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bio::circulatory::Vasculature Member List

This is the complete list of members for bio::circulatory::Vasculature, including all inherited members.

UnorderedMotif< TranscriptionFactor >::Class< Vasculature >::AbstractMotif()bio::chemical::AbstractMotif
UnorderedMotif< TranscriptionFactor >::Class< Vasculature >::AbstractMotif(const AbstractMotif &other)bio::chemical::AbstractMotif
bio::molecular::Vesicle::Class< Vasculature >::AbstractMotif()bio::chemical::AbstractMotif
bio::molecular::Vesicle::Class< Vasculature >::AbstractMotif(const AbstractMotif &other)bio::chemical::AbstractMotif
DependentMotif< BloodVessel, Vasculature >::AbstractMotif()bio::chemical::AbstractMotif
DependentMotif< BloodVessel, Vasculature >::AbstractMotif(const AbstractMotif &other)bio::chemical::AbstractMotif
Activate(const Id &proteinId)bio::genetic::Expressor
Activate(const Name &proteinName)bio::genetic::Expressor
Activate()bio::genetic::Expressorinline
Class< Vasculature >::Add(const T t)bio::chemical::UnorderedStructureInterfaceinline
Class< Vasculature >::Add(Pointer< T > t)bio::chemical::UnorderedStructureInterfaceinline
bio::cellular::Tissue::Add(const T t)bio::cellular::Tissueinline
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::AddImplementation(const TranscriptionFactor content)bio::chemical::UnorderedMotif< TranscriptionFactor >inlinevirtual
Class< Vasculature >::bio::molecular::Vesicle::AddImplementation(ContentPointer content)bio::chemical::DependentMotif< Solute, Solution >inlinevirtual
Class< Vasculature >::bio::chemical::LinearMotif::AddImplementation(ContentPointer content)bio::chemical::LinearMotif< CONTENT_TYPE >inlinevirtual
Class< Vasculature >::UnorderedMotif< Pointer< CONTENT_TYPE > >::AddImplementation(const Pointer< CONTENT_TYPE > content)bio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inlinevirtual
DependentMotif< BloodVessel, Vasculature >::AddImplementation(ContentPointer content)bio::chemical::DependentMotif< BloodVessel, Vasculature >inlinevirtual
AddSharedImplementation(ContentPointer content)bio::chemical::LinearMotif< CONTENT_TYPE >inlineprotectedvirtual
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::AddSharedWaveByContentType(Pointer< physical::Wave > wave)bio::chemical::AbstractMotifinlinevirtual
bio::molecular::Vesicle::AddSharedWaveByContentType(Pointer< physical::Wave > wave)bio::chemical::LinearMotif< CONTENT_TYPE >inlinevirtual
AddToTranscriptome(Pointer< const RNA > toExpress)bio::genetic::Expressorvirtual
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::AddWaveByContentType(Pointer< physical::Wave > wave)bio::chemical::AbstractMotifinlinevirtual
bio::molecular::Vesicle::AddWaveByContentType(Pointer< physical::Wave > wave)bio::chemical::LinearMotif< CONTENT_TYPE >inlinevirtual
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::AllocateContents enum valuebio::chemical::UnorderedMotif< TranscriptionFactor >protected
bio::molecular::Vesicle::Class< Vasculature >::AllocateContents enum valuebio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >protected
DependentMotif< BloodVessel, Vasculature >::AllocateContents enum valuebio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >protected
Class< Vasculature >::Apoptose()bio::cellular::Class< T >inlinevirtual
bio::cellular::Tissue::Apoptose()bio::cellular::Class< Tissue >inlinevirtual
As() constbio::chemical::Atom
Class< Vasculature >::bio::AsAtom()bio::chemical::Class< T >inlinevirtual
Class< Vasculature >::bio::AsAtom() constbio::chemical::Class< T >inlinevirtual
Class< Vasculature >::bio::chemical::Substance::AsAtom()bio::chemical::Class< Substance >inlinevirtual
Class< Vasculature >::bio::chemical::Substance::AsAtom() constbio::chemical::Class< Substance >inlinevirtual
Class< Vasculature >::bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::Class< Solution >::AsAtom()bio::chemical::Class< Solution >inlinevirtual
Class< Vasculature >::bio::chemical::Solution::AsAtom() constbio::chemical::Class< Solution >inlinevirtual
bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::DependentMotif< Solute, Solution >::bio::chemical::LinearMotif::Class< LinearMotif< CONTENT_TYPE > >::AsAtom()bio::chemical::Class< LinearMotif< CONTENT_TYPE > >inlinevirtual
bio::chemical::LinearMotif::AsAtom() constbio::chemical::Class< LinearMotif< CONTENT_TYPE > >inlinevirtual
AsBonded() constbio::chemical::Atom
AsBondedQuantum() constbio::chemical::Atominline
AsLogWriter() constbio::log::Writervirtual
Class< Vasculature >::bio::Class< Vasculature >::AsWave()bio::chemical::Class< T >inline
Class< Vasculature >::bio::Class< Vasculature >::AsWave() constbio::chemical::Class< T >inline
Class< Vasculature >::bio::chemical::Substance::AsWave()bio::chemical::Class< Substance >inline
Class< Vasculature >::bio::chemical::Substance::AsWave() constbio::chemical::Class< Substance >inline
Class< Vasculature >::bio::molecular::Molecule::Class< Vasculature >::AsWave()bio::chemical::Class< T >inline
Class< Vasculature >::bio::molecular::Molecule::Class< Vasculature >::AsWave() constbio::chemical::Class< T >inline
Class< Vasculature >::bio::genetic::Expressor::Class< Vasculature >::AsWave()bio::chemical::Class< T >inline
Class< Vasculature >::bio::genetic::Expressor::Class< Vasculature >::AsWave() constbio::chemical::Class< T >inline
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::Class< Vasculature >::AsWave()bio::chemical::Class< T >inline
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::Class< Vasculature >::AsWave() constbio::chemical::Class< T >inline
Class< Vasculature >::bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::Class< Solution >::AsWave()bio::chemical::Class< Solution >inline
Class< Vasculature >::bio::chemical::Solution::AsWave() constbio::chemical::Class< Solution >inline
Class< Vasculature >::bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::DependentMotif< Solute, Solution >::bio::chemical::LinearMotif::Class< LinearMotif< CONTENT_TYPE > >::AsWave()bio::chemical::Class< LinearMotif< CONTENT_TYPE > >inline
Class< Vasculature >::bio::chemical::LinearMotif::AsWave() constbio::chemical::Class< LinearMotif< CONTENT_TYPE > >inline
Class< Vasculature >::bio::physical::Periodic::AsWave()bio::physical::Class< Periodic >inline
Class< Vasculature >::bio::physical::Periodic::AsWave() constbio::physical::Class< Periodic >inline
Class< Vasculature >::bio::molecular::Vesicle::Class< Vasculature >::AsWave()bio::chemical::Class< T >inline
Class< Vasculature >::bio::molecular::Vesicle::Class< Vasculature >::AsWave() constbio::chemical::Class< T >inline
DependentMotif< BloodVessel, Vasculature >::AsWave()bio::chemical::Class< T >inline
DependentMotif< BloodVessel, Vasculature >::AsWave() constbio::chemical::Class< T >inline
DependentMotif< BloodVessel, Vasculature >::AsWave()bio::chemical::Class< LinearMotif< CONTENT_TYPE > >inline
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::AsWave() constbio::chemical::Class< LinearMotif< CONTENT_TYPE > >inline
bio::chemical::LinearMotif::DependentMotif< BloodVessel, Vasculature >::AsWave()bio::chemical::Class< T >inline
UnorderedMotif< Pointer< CONTENT_TYPE > >::DependentMotif< BloodVessel, Vasculature >::AsWave() constbio::chemical::Class< T >inline
bio::cellular::Tissue::AsWave()bio::chemical::Class< T >inline
bio::cellular::Tissue::AsWave() constbio::chemical::Class< T >inline
Atom()bio::chemical::Atomexplicit
Atom(const Atom &other)bio::chemical::Atomexplicit
Class< Vasculature >::bio::Attenuate(Pointer< const physical::Wave > other)bio::chemical::Class< T >inlinevirtual
Class< Vasculature >::bio::chemical::Substance::Attenuate(Pointer< const physical::Wave > other)bio::chemical::Class< Substance >inlinevirtual
Class< Vasculature >::bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::Class< Solution >::Attenuate(Pointer< const physical::Wave > other)bio::chemical::Class< Solution >inlinevirtual
Class< Vasculature >::bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::DependentMotif< Solute, Solution >::Attenuate(Pointer< const physical::Wave > other)bio::chemical::DependentMotif< Solute, Solution >inlinevirtual
DependentMotif< BloodVessel, Vasculature >::Attenuate(Pointer< const physical::Wave > other)bio::chemical::DependentMotif< BloodVessel, Vasculature >inlinevirtual
BIO_DEFAULT_IDENTIFIABLE_CONSTRUCTORS(circulatory, Vasculature, filter::Circulatory()) virtual ~Vasculature()bio::circulatory::Vasculature
Class< Vasculature >::BIO_DEFAULT_IDENTIFIABLE_CONSTRUCTORS(molecular, Vesicle, filter::Molecular()) Vesicle(const Vesicle &toCopy)bio::molecular::Vesicle
Class< Vasculature >::bio::chemical::Solution::BIO_DEFAULT_IDENTIFIABLE_CONSTRUCTORS(chemical, Solution, filter::Chemical()) virtual Id Dissolve(Pointer< Substance > toDissolvebio::chemical::Solution
bio::cellular::Tissue::BIO_DEFAULT_IDENTIFIABLE_CONSTRUCTORS(cellular, Tissue, filter::Cellular()) virtual ~Tissue()bio::cellular::Tissue
Class< Vasculature >::bio::BIO_DEFAULT_IDENTIFIABLE_CONSTRUCTORS_WITH_COMMON_CONSTRUCTOR(chemical, Substance, filter::Chemical()) Substance(const UnorderedMotif< Property > &propertiesbio::chemical::Substance
Class< Vasculature >::bio::molecular::Molecule::BIO_DEFAULT_IDENTIFIABLE_CONSTRUCTORS_WITH_COMMON_CONSTRUCTOR(molecular, Molecule, filter::Molecular()) Molecule(const Molecule &toCopy)bio::molecular::Molecule
bio::genetic::Expressor::BIO_DEFAULT_IDENTIFIABLE_CONSTRUCTORS_WITH_COMMON_CONSTRUCTOR(genetic, Expressor, filter::Genetic()) virtual ~Expressor()bio::genetic::Expressor
BondClonePolicy typedefbio::chemical::Atom
BondMutator typedefbio::chemical::Atom
BondVisitor typedefbio::chemical::Atom
BreakBond(T toDisassociate, BondType type=bond_type::Unknown())bio::chemical::Atominline
BreakBondImplementation(AtomicNumber id, BondType type)bio::chemical::Atomvirtual
BreakBondImplementationLocked(AtomicNumber id, BondType type)bio::chemical::Atom
Class< Vasculature >::BreakDonatedBonds(Pointer< chemical::Atom > receiver)bio::Metallic< chemical::DependentMotif< Surface, Molecule > >inlinestatic
bio::cellular::Tissue::Metallic< chemical::DependentMotif< Cell, Tissue > >::BreakDonatedBonds(Pointer< chemical::Atom > receiver)bio::Metallic< chemical::DependentMotif< Cell, Tissue > >inlinestatic
bio::cellular::Tissue::Metallic< chemical::DependentMotif< Tissue, Tissue > >::BreakDonatedBonds(Pointer< chemical::Atom > receiver)bio::Metallic< chemical::DependentMotif< Tissue, Tissue > >inlinestatic
Class< Vasculature >::BreakDonatedCollectVisitor(const chemical::Bond &bond, void *ctx)bio::Metallic< chemical::DependentMotif< Surface, Molecule > >inlinestatic
bio::cellular::Tissue::Metallic< chemical::DependentMotif< Cell, Tissue > >::BreakDonatedCollectVisitor(const chemical::Bond &bond, void *ctx)bio::Metallic< chemical::DependentMotif< Cell, Tissue > >inlinestatic
bio::cellular::Tissue::Metallic< chemical::DependentMotif< Tissue, Tissue > >::BreakDonatedCollectVisitor(const chemical::Bond &bond, void *ctx)bio::Metallic< chemical::DependentMotif< Tissue, Tissue > >inlinestatic
CacheProteins()bio::circulatory::Vasculaturevirtual
Class< Vasculature >::CheckIn()bio::cellular::Class< T >inlinevirtual
bio::cellular::Tissue::CheckIn()bio::cellular::Class< Tissue >inlinevirtual
Class< Vasculature >::Class(Pointer< Vasculature > object, Filter filter=filter::Default(), Milliseconds interval=physical::Periodic::GetDefaultInterval())bio::circulatory::Class< Vasculature >inline
Class< Vasculature >::Class(Pointer< Vasculature > object, const Name &name, Filter filter=filter::Default(), Milliseconds interval=physical::Periodic::GetDefaultInterval())bio::circulatory::Class< Vasculature >inline
Class< Vasculature >::Class(Pointer< Vasculature > object, const Id &id, Filter filter=filter::Default(), Milliseconds interval=physical::Periodic::GetDefaultInterval())bio::circulatory::Class< Vasculature >inline
Class< Vasculature >::bio::cellular::Class::Class(Pointer< T > object, Filter filter=filter::Default(), Milliseconds interval=GetDefaultInterval())bio::cellular::Class< T >inline
Class< Vasculature >::bio::cellular::Class::Class(Pointer< T > object, const Name &name, Filter filter=filter::Default(), Milliseconds interval=GetDefaultInterval())bio::cellular::Class< T >inline
Class< Vasculature >::bio::cellular::Class::Class(Pointer< T > object, const Id &id, Filter filter=filter::Default(), Milliseconds interval=GetDefaultInterval())bio::cellular::Class< T >inline
Class< Vasculature >::bio::genetic::Class::Class(Pointer< T > object, Filter filter=filter::Default())bio::genetic::Class< T >inline
Class< Vasculature >::bio::genetic::Class::Class(Pointer< T > object, const Name &name, Filter filter=filter::Default())bio::genetic::Class< T >inline
Class< Vasculature >::bio::genetic::Class::Class(Pointer< T > object, const Id &id, Filter filter=filter::Default())bio::genetic::Class< T >inline
Class< Vasculature >::bio::molecular::Class::Class(Pointer< T > object, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::molecular::Class< T >inline
Class< Vasculature >::bio::molecular::Class::Class(Pointer< T > object, const Name &name, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::molecular::Class< T >inline
Class< Vasculature >::bio::molecular::Class::Class(Pointer< T > object, const Id &id, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::molecular::Class< T >inline
Class< Vasculature >::bio::chemical::Class::Class< Vasculature >::Class(const Class &other)bio::chemical::Class< T >inline
Class< Vasculature >::bio::physical::Class::Class(Pointer< T > object, Pointer< Symmetry > symmetry=NULL)bio::physical::Class< T >inline
Class< Vasculature >::bio::physical::Class::Class(Pointer< T > object, SymmetryFactory symmetryFactory)bio::physical::Class< T >inline
Class< Vasculature >::bio::physical::Class::Class(const Class &other)bio::physical::Class< T >inline
Class< Vasculature >::bio::Identifiable< Id >::Class(Pointer< T > object, Pointer< Symmetry > symmetry=NULL)bio::physical::Class< T >inline
Class< Vasculature >::bio::Identifiable< Id >::Class(Pointer< T > object, SymmetryFactory symmetryFactory)bio::physical::Class< T >inline
Class< Vasculature >::bio::Identifiable< Id >::Class(const Class &other)bio::physical::Class< T >inline
Class< Vasculature >::bio::log::Writer::Class(Pointer< Writer > object, Pointer< Symmetry > symmetry=NULL)bio::physical::Class< Writer >inline
Class< Vasculature >::bio::log::Writer::Class(Pointer< Writer > object, SymmetryFactory symmetryFactory)bio::physical::Class< Writer >inline
Class< Vasculature >::bio::log::Writer::Class(const Class &other)bio::physical::Class< Writer >inline
Class< Vasculature >::bio::log::Writer::Class(Pointer< Filterable > object, Pointer< Symmetry > symmetry=NULL)bio::physical::Class< Filterable >inline
Class< Vasculature >::bio::physical::Filterable::Class(Pointer< Filterable > object, SymmetryFactory symmetryFactory)bio::physical::Class< Filterable >inline
Class< Vasculature >::bio::physical::Filterable::Class(const Class &other)bio::physical::Class< Filterable >inline
Class< Vasculature >::bio::chemical::Atom::Class(Pointer< Atom > object, Pointer< Symmetry > symmetry=NULL)bio::physical::Class< Atom >inline
Class< Vasculature >::bio::chemical::Atom::Class(Pointer< Atom > object, SymmetryFactory symmetryFactory)bio::physical::Class< Atom >inline
Class< Vasculature >::bio::chemical::Atom::Class(const Class &other)bio::physical::Class< Atom >inline
Class< Vasculature >::bio::chemical::Substance::Class(Pointer< Substance > object, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::chemical::Class< Substance >inline
Class< Vasculature >::bio::chemical::Substance::Class(Pointer< Substance > object, const Name &name, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::chemical::Class< Substance >inline
Class< Vasculature >::bio::chemical::Substance::Class(Pointer< Substance > object, const Id &id, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::chemical::Class< Substance >inline
Class< Vasculature >::bio::chemical::Substance::Class(const Class &other)bio::chemical::Class< Substance >inline
Class< Vasculature >::bio::molecular::Molecule::Class(Pointer< Molecule > object, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::molecular::Class< Molecule >inline
Class< Vasculature >::bio::molecular::Molecule::Class(Pointer< Molecule > object, const Name &name, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::molecular::Class< Molecule >inline
Class< Vasculature >::bio::molecular::Molecule::Class(Pointer< Molecule > object, const Id &id, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::molecular::Class< Molecule >inline
Class< Vasculature >::bio::chemical::Class::Class< Vasculature >::Class(const Class &other)bio::chemical::Class< T >inline
Class< Vasculature >::bio::genetic::Expressor::Class(Pointer< Expressor > object, Filter filter=filter::Default())bio::genetic::Class< Expressor >inline
Class< Vasculature >::bio::genetic::Expressor::Class(Pointer< Expressor > object, const Name &name, Filter filter=filter::Default())bio::genetic::Class< Expressor >inline
Class< Vasculature >::bio::genetic::Expressor::Class(Pointer< Expressor > object, const Id &id, Filter filter=filter::Default())bio::genetic::Class< Expressor >inline
Class< Vasculature >::bio::molecular::Class::Class(Pointer< T > object, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::molecular::Class< T >inline
Class< Vasculature >::bio::molecular::Class::Class(Pointer< T > object, const Name &name, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::molecular::Class< T >inline
Class< Vasculature >::bio::molecular::Class::Class(Pointer< T > object, const Id &id, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::molecular::Class< T >inline
Class< Vasculature >::bio::genetic::Expressor::Class(Pointer< Vesicle > object, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::molecular::Class< Vesicle >inline
Class< Vasculature >::bio::molecular::Vesicle::Class(Pointer< Vesicle > object, const Name &name, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::molecular::Class< Vesicle >inline
Class< Vasculature >::bio::molecular::Vesicle::Class(Pointer< Vesicle > object, const Id &id, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::molecular::Class< Vesicle >inline
Class< Vasculature >::bio::genetic::Expressor::Class(Pointer< Solution > object, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::chemical::Class< Solution >inline
Class< Vasculature >::bio::chemical::Solution::Class(Pointer< Solution > object, const Name &name, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::chemical::Class< Solution >inline
Class< Vasculature >::bio::chemical::Solution::Class(Pointer< Solution > object, const Id &id, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::chemical::Class< Solution >inline
Class< Vasculature >::bio::chemical::Solution::Class(const Class &other)bio::chemical::Class< Solution >inline
Class< Vasculature >::bio::genetic::Expressor::Class(Pointer< LinearMotif< CONTENT_TYPE > > object, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::chemical::Class< LinearMotif< CONTENT_TYPE > >inline
Class< Vasculature >::bio::chemical::LinearMotif::Class(Pointer< LinearMotif< CONTENT_TYPE > > object, const Name &name, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::chemical::Class< LinearMotif< CONTENT_TYPE > >inline
Class< Vasculature >::bio::chemical::LinearMotif::Class(Pointer< LinearMotif< CONTENT_TYPE > > object, const Id &id, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::chemical::Class< LinearMotif< CONTENT_TYPE > >inline
Class< Vasculature >::bio::chemical::LinearMotif::Class(const Class &other)bio::chemical::Class< LinearMotif< CONTENT_TYPE > >inline
Class< Vasculature >::bio::physical::Periodic::Class(Pointer< Periodic > object, Pointer< Symmetry > symmetry=NULL)bio::physical::Class< Periodic >inline
Class< Vasculature >::bio::physical::Periodic::Class(Pointer< Periodic > object, SymmetryFactory symmetryFactory)bio::physical::Class< Periodic >inline
Class< Vasculature >::bio::physical::Periodic::Class(const Class &other)bio::physical::Class< Periodic >inline
DependentMotif< BloodVessel, Vasculature >::Class(const Class &other)bio::chemical::Class< T >inline
DependentMotif< BloodVessel, Vasculature >::bio::physical::Class::Class(Pointer< T > object, Pointer< Symmetry > symmetry=NULL)bio::physical::Class< T >inline
DependentMotif< BloodVessel, Vasculature >::bio::physical::Class::Class(Pointer< T > object, SymmetryFactory symmetryFactory)bio::physical::Class< T >inline
DependentMotif< BloodVessel, Vasculature >::bio::physical::Class::Class(const Class &other)bio::physical::Class< T >inline
DependentMotif< BloodVessel, Vasculature >::Class(Pointer< LinearMotif< CONTENT_TYPE > > object, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::chemical::Class< LinearMotif< CONTENT_TYPE > >inline
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::Class(Pointer< LinearMotif< CONTENT_TYPE > > object, const Name &name, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::chemical::Class< LinearMotif< CONTENT_TYPE > >inline
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::Class(Pointer< LinearMotif< CONTENT_TYPE > > object, const Id &id, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::chemical::Class< LinearMotif< CONTENT_TYPE > >inline
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::Class(const Class &other)bio::chemical::Class< LinearMotif< CONTENT_TYPE > >inline
DependentMotif< BloodVessel, Vasculature >::bio::physical::Class::Class(Pointer< T > object, Pointer< Symmetry > symmetry=NULL)bio::physical::Class< T >inline
DependentMotif< BloodVessel, Vasculature >::bio::physical::Class::Class(Pointer< T > object, SymmetryFactory symmetryFactory)bio::physical::Class< T >inline
DependentMotif< BloodVessel, Vasculature >::bio::physical::Class::Class(const Class &other)bio::physical::Class< T >inline
DependentMotif< BloodVessel, Vasculature >::UnorderedMotif< Pointer< CONTENT_TYPE > >::Class(const Class &other)bio::chemical::Class< T >inline
DependentMotif< BloodVessel, Vasculature >::bio::physical::Class::Class(Pointer< T > object, Pointer< Symmetry > symmetry=NULL)bio::physical::Class< T >inline
DependentMotif< BloodVessel, Vasculature >::bio::physical::Class::Class(Pointer< T > object, SymmetryFactory symmetryFactory)bio::physical::Class< T >inline
DependentMotif< BloodVessel, Vasculature >::bio::physical::Class::Class(const Class &other)bio::physical::Class< T >inline
bio::cellular::Tissue::Class(Pointer< Tissue > object, Filter filter=filter::Default(), Milliseconds interval=GetDefaultInterval())bio::cellular::Class< Tissue >inline
bio::cellular::Tissue::Class(Pointer< Tissue > object, const Name &name, Filter filter=filter::Default(), Milliseconds interval=GetDefaultInterval())bio::cellular::Class< Tissue >inline
bio::cellular::Tissue::Class(Pointer< Tissue > object, const Id &id, Filter filter=filter::Default(), Milliseconds interval=GetDefaultInterval())bio::cellular::Class< Tissue >inline
bio::genetic::Class::Class(Pointer< T > object, Filter filter=filter::Default())bio::genetic::Class< T >inline
bio::genetic::Class::Class(Pointer< T > object, const Name &name, Filter filter=filter::Default())bio::genetic::Class< T >inline
bio::genetic::Class::Class(Pointer< T > object, const Id &id, Filter filter=filter::Default())bio::genetic::Class< T >inline
bio::molecular::Class::Class(Pointer< T > object, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::molecular::Class< T >inline
bio::molecular::Class::Class(Pointer< T > object, const Name &name, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::molecular::Class< T >inline
bio::molecular::Class::Class(Pointer< T > object, const Id &id, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())bio::molecular::Class< T >inline
bio::chemical::Class::Class(const Class &other)bio::chemical::Class< T >inline
bio::physical::Class::Class(Pointer< T > object, Pointer< Symmetry > symmetry=NULL)bio::physical::Class< T >inline
bio::physical::Class::Class(Pointer< T > object, SymmetryFactory symmetryFactory)bio::physical::Class< T >inline
bio::physical::Class::Class(const Class &other)bio::physical::Class< T >inline
Clear()bio::chemical::UnorderedStructureInterfaceinline
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::ClearImplementation()bio::chemical::UnorderedMotif< TranscriptionFactor >inlinevirtual
bio::molecular::Vesicle::ClearImplementation()bio::chemical::LinearMotif< CONTENT_TYPE >inlinevirtual
ClearTranscriptome()bio::genetic::Expressorprotected
Class< Vasculature >::bio::Clone() constbio::chemical::Class< T >inlinevirtual
Class< Vasculature >::bio::chemical::Substance::Clone() constbio::chemical::Class< Substance >inlinevirtual
Class< Vasculature >::bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::Class< Solution >::Clone() constbio::chemical::Class< Solution >inlinevirtual
Class< Vasculature >::bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::DependentMotif< Solute, Solution >::bio::chemical::LinearMotif::Class< LinearMotif< CONTENT_TYPE > >::Clone() constbio::chemical::Class< LinearMotif< CONTENT_TYPE > >inlinevirtual
bio::physical::Periodic::Clone() constbio::physical::Class< Periodic >inlinevirtual
CloneBondsFrom(const Atom &other, BondClonePolicy policy=&Atom::DefaultBondClonePolicy)bio::chemical::Atom
CommonConstructor()bio::genetic::Expressor
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::Contents typedefbio::chemical::UnorderedMotif< TranscriptionFactor >
bio::molecular::Vesicle::Class< Vasculature >::Contents typedefbio::chemical::LinearMotif< CONTENT_TYPE >
DependentMotif< BloodVessel, Vasculature >::Contents typedefbio::chemical::LinearMotif< CONTENT_TYPE >
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::ContentsAllocation enum namebio::chemical::UnorderedMotif< TranscriptionFactor >protected
bio::molecular::Vesicle::Class< Vasculature >::ContentsAllocation enum namebio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >protected
DependentMotif< BloodVessel, Vasculature >::ContentsAllocation enum namebio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >protected
Class< Vasculature >::bio::Class< Vasculature >::Class< Vasculature >::Convert(Pointer< Wave > wave)bio::physical::Class< T >inlinestatic
Class< Vasculature >::bio::Identifiable< Id >::bio::Class< Vasculature >::Convert(Pointer< Wave > wave)bio::physical::Class< T >inlinestatic
Class< Vasculature >::bio::log::Writer::Class< Writer >::Convert(Pointer< Wave > wave)bio::physical::Class< Writer >inlinestatic
Class< Vasculature >::bio::log::Writer::bio::physical::Filterable::Convert(Pointer< Wave > wave)bio::physical::Class< Filterable >inlinestatic
Class< Vasculature >::bio::chemical::Atom::Convert(Pointer< Wave > wave)bio::physical::Class< Atom >inlinestatic
Class< Vasculature >::bio::chemical::Substance::Class< Substance >::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Convert(Pointer< Wave > wave)bio::physical::Class< T >inlinestatic
Class< Vasculature >::bio::molecular::Molecule::Class< Molecule >::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Convert(Pointer< Wave > wave)bio::physical::Class< T >inlinestatic
Class< Vasculature >::bio::genetic::Expressor::Class< Expressor >::bio::Class< Expressor >::Class< Expressor >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Convert(Pointer< Wave > wave)bio::physical::Class< T >inlinestatic
Class< Vasculature >::bio::genetic::Expressor::UnorderedMotif< TranscriptionFactor >::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Convert(Pointer< Wave > wave)bio::physical::Class< T >inlinestatic
Class< Vasculature >::bio::physical::Periodic::Convert(Pointer< Wave > wave)bio::physical::Class< Periodic >inlinestatic
bio::molecular::Vesicle::Class< Vesicle >::bio::Class< Vesicle >::Class< Vesicle >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Convert(Pointer< Wave > wave)bio::physical::Class< T >inlinestatic
DependentMotif< BloodVessel, Vasculature >::bio::Convert(Pointer< Wave > wave)bio::physical::Class< T >inlinestatic
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::Class< LinearMotif< CONTENT_TYPE > >::bio::Class< LinearMotif< CONTENT_TYPE > >::Class< LinearMotif< CONTENT_TYPE > >::Convert(Pointer< Wave > wave)bio::physical::Class< T >inlinestatic
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::UnorderedMotif< Pointer< CONTENT_TYPE > >::bio::Convert(Pointer< Wave > wave)bio::physical::Class< T >inlinestatic
bio::cellular::Tissue::Class< Tissue >::bio::Convert(Pointer< Wave > wave)bio::physical::Class< T >inlinestatic
Class< Vasculature >::bio::Covalent< UnorderedMotif< Property > >::Covalent()bio::Covalent< UnorderedMotif< Property > >inline
Class< Vasculature >::bio::Covalent< UnorderedMotif< Property > >::Covalent(const Covalent &other)bio::Covalent< UnorderedMotif< Property > >inline
Class< Vasculature >::bio::Covalent< UnorderedMotif< State > >::Covalent()bio::Covalent< UnorderedMotif< State > >inline
Class< Vasculature >::bio::Covalent< UnorderedMotif< State > >::Covalent(const Covalent &other)bio::Covalent< UnorderedMotif< State > >inline
Class< Vasculature >::bio::genetic::Expressor::Covalent< chemical::LinearMotif< Plasmid > >::Covalent()bio::Covalent< chemical::LinearMotif< Plasmid > >inline
Class< Vasculature >::bio::Covalent< chemical::LinearMotif< Plasmid > >::Covalent(const Covalent &other)bio::Covalent< chemical::LinearMotif< Plasmid > >inline
bio::genetic::Expressor::Covalent< chemical::LinearMotif< molecular::Protein > >::Covalent()bio::Covalent< chemical::LinearMotif< molecular::Protein > >inline
Covalent< chemical::LinearMotif< molecular::Protein > >::Covalent(const Covalent &other)bio::Covalent< chemical::LinearMotif< molecular::Protein > >inline
CreateDefaultProteins()bio::circulatory::Vasculaturevirtual
CreateImplementation()bio::chemical::LinearMotif< CONTENT_TYPE >inlineprotectedvirtual
CreateWithIdImplementation(const Id &id)bio::chemical::LinearMotif< CONTENT_TYPE >inlineprotectedvirtual
CreateWithNameImplementation(const Name &name)bio::chemical::LinearMotif< CONTENT_TYPE >inlineprotectedvirtual
Class< Vasculature >::Crest()bio::cellular::Class< T >inlinevirtual
bio::cellular::Tissue::Crest()bio::cellular::Class< Tissue >inlinevirtual
DefaultBondClonePolicy(const Bond &bond)bio::chemical::Atomstatic
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::DeferContents enum valuebio::chemical::UnorderedMotif< TranscriptionFactor >protected
bio::molecular::Vesicle::Class< Vasculature >::DeferContents enum valuebio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >protected
DependentMotif< BloodVessel, Vasculature >::DeferContents enum valuebio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >protected
Define(const Name &varName)bio::molecular::Moleculeinline
Define(const Id &id)bio::molecular::Moleculeinline
Define(const Name &varName)bio::molecular::Moleculeinline
Define(const Id &id)bio::molecular::Moleculeinline
Define(const Name &varName, const T &assignment)bio::molecular::Moleculeinline
Define(const Id &id, const T &assignment)bio::molecular::Moleculeinline
Class< Vasculature >::bio::Demodulate()bio::chemical::Class< T >inlinevirtual
Class< Vasculature >::bio::Demodulate() constbio::chemical::Class< T >inlinevirtual
Class< Vasculature >::bio::chemical::Substance::Demodulate()bio::chemical::Class< Substance >inlinevirtual
Class< Vasculature >::bio::chemical::Substance::Demodulate() constbio::chemical::Class< Substance >inlinevirtual
Class< Vasculature >::bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::Class< Solution >::Demodulate()bio::chemical::Class< Solution >inlinevirtual
Class< Vasculature >::bio::chemical::Solution::Demodulate() constbio::chemical::Class< Solution >inlinevirtual
bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::DependentMotif< Solute, Solution >::bio::chemical::LinearMotif::Class< LinearMotif< CONTENT_TYPE > >::Demodulate()bio::chemical::Class< LinearMotif< CONTENT_TYPE > >inlinevirtual
bio::chemical::LinearMotif::Demodulate() constbio::chemical::Class< LinearMotif< CONTENT_TYPE > >inlinevirtual
Class< Vasculature >::DependentMotif(EnvironmentPointer environment=NULL)bio::chemical::DependentMotif< Solute, Solution >inlineexplicitprotected
Class< Vasculature >::DependentMotif(const typename LinearMotif< Solute >::Contents *contents, EnvironmentPointer environment=NULL)bio::chemical::DependentMotif< Solute, Solution >inlineexplicitprotected
Class< Vasculature >::DependentMotif(const DependentMotif< Solute, Solution > &toCopy)bio::chemical::DependentMotif< Solute, Solution >inlineprotected
DependentMotif< BloodVessel, Vasculature >::DependentMotif(EnvironmentPointer environment=NULL)bio::chemical::DependentMotif< BloodVessel, Vasculature >inlineexplicit
DependentMotif< BloodVessel, Vasculature >::DependentMotif(const typename LinearMotif< BloodVessel >::Contents *contents, EnvironmentPointer environment=NULL)bio::chemical::DependentMotif< BloodVessel, Vasculature >inlineexplicit
DependentMotif< BloodVessel, Vasculature >::DependentMotif(const DependentMotif< BloodVessel, Vasculature > &toCopy)bio::chemical::DependentMotif< BloodVessel, Vasculature >inline
DifferentiateCells()bio::cellular::Tissuevirtual
diffusionEffortbio::chemical::Solutionprotected
diffusionTimebio::chemical::Solutionprotected
Disable()bio::chemical::Substancevirtual
Class< Vasculature >::bio::Disattenuate(Pointer< const physical::Wave > other)bio::chemical::Class< T >inlinevirtual
Class< Vasculature >::bio::chemical::Substance::Disattenuate(Pointer< const physical::Wave > other)bio::chemical::Class< Substance >inlinevirtual
Class< Vasculature >::bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::Class< Solution >::Disattenuate(Pointer< const physical::Wave > other)bio::chemical::Class< Solution >inlinevirtual
Class< Vasculature >::bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::DependentMotif< Solute, Solution >::Disattenuate(Pointer< const physical::Wave > other)bio::chemical::DependentMotif< Solute, Solution >inlinevirtual
DependentMotif< BloodVessel, Vasculature >::Disattenuate(Pointer< const physical::Wave > other)bio::chemical::DependentMotif< BloodVessel, Vasculature >inlinevirtual
Class< Vasculature >::DonateBonds(Pointer< chemical::Atom > donor, Pointer< chemical::Atom > receiver)bio::Metallic< chemical::DependentMotif< Surface, Molecule > >inlinestatic
bio::cellular::Tissue::Metallic< chemical::DependentMotif< Cell, Tissue > >::DonateBonds(Pointer< chemical::Atom > donor, Pointer< chemical::Atom > receiver)bio::Metallic< chemical::DependentMotif< Cell, Tissue > >inlinestatic
bio::cellular::Tissue::Metallic< chemical::DependentMotif< Tissue, Tissue > >::DonateBonds(Pointer< chemical::Atom > donor, Pointer< chemical::Atom > receiver)bio::Metallic< chemical::DependentMotif< Tissue, Tissue > >inlinestatic
Class< Vasculature >::DonateCollectVisitor(const chemical::Bond &bond, void *ctx)bio::Metallic< chemical::DependentMotif< Surface, Molecule > >inlinestatic
bio::cellular::Tissue::Metallic< chemical::DependentMotif< Cell, Tissue > >::DonateCollectVisitor(const chemical::Bond &bond, void *ctx)bio::Metallic< chemical::DependentMotif< Cell, Tissue > >inlinestatic
bio::cellular::Tissue::Metallic< chemical::DependentMotif< Tissue, Tissue > >::DonateCollectVisitor(const chemical::Bond &bond, void *ctx)bio::Metallic< chemical::DependentMotif< Tissue, Tissue > >inlinestatic
DuplicateFrom(Pointer< Molecule > source, const Name &surface)bio::molecular::Moleculevirtual
Efflux(const Id &soluteId)bio::chemical::Solutionprotectedvirtual
Efflux(const Id &soluteId) constbio::chemical::Solutionprotectedvirtual
Efflux(const Name &substanceName)bio::chemical::Solutionprotectedvirtual
Efflux(const Name &substanceName) constbio::chemical::Solutionprotectedvirtual
bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Elementary(const Properties properties)bio::chemical::Elementary< T >inlineprotected
bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Elementary()bio::chemical::Elementary< T >inlineprotected
bio::chemical::Substance::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Elementary(const Properties properties)bio::chemical::Elementary< T >inline
bio::chemical::Substance::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Elementary()bio::chemical::Elementary< T >inline
bio::molecular::Molecule::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Elementary(const Properties properties)bio::chemical::Elementary< T >inline
bio::molecular::Molecule::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Elementary()bio::chemical::Elementary< T >inline
bio::genetic::Expressor::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Elementary(const Properties properties)bio::chemical::Elementary< T >inline
bio::genetic::Expressor::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Elementary()bio::chemical::Elementary< T >inline
UnorderedMotif< TranscriptionFactor >::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Elementary(const Properties properties)bio::chemical::Elementary< T >inline
UnorderedMotif< TranscriptionFactor >::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Elementary()bio::chemical::Elementary< T >inline
bio::molecular::Vesicle::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Elementary(const Properties properties)bio::chemical::Elementary< T >inline
bio::molecular::Vesicle::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Elementary()bio::chemical::Elementary< T >inline
DependentMotif< BloodVessel, Vasculature >::Elementary(const Properties properties)bio::chemical::Elementary< T >inline
DependentMotif< BloodVessel, Vasculature >::Elementary()bio::chemical::Elementary< T >inline
bio::chemical::LinearMotif::DependentMotif< BloodVessel, Vasculature >::DependentMotif< BloodVessel, Vasculature >::Elementary(const Properties properties)bio::chemical::Elementary< T >inline
bio::chemical::LinearMotif::DependentMotif< BloodVessel, Vasculature >::DependentMotif< BloodVessel, Vasculature >::Elementary()bio::chemical::Elementary< T >inline
UnorderedMotif< Pointer< CONTENT_TYPE > >::DependentMotif< BloodVessel, Vasculature >::Elementary(const Properties properties)bio::chemical::Elementary< T >inline
UnorderedMotif< Pointer< CONTENT_TYPE > >::DependentMotif< BloodVessel, Vasculature >::Elementary()bio::chemical::Elementary< T >inline
bio::cellular::Tissue::Elementary(const Properties properties)bio::chemical::Elementary< T >inline
bio::cellular::Tissue::Elementary()bio::chemical::Elementary< T >inline
Enable()bio::chemical::Substancevirtual
Class< Vasculature >::EnvironmentDependent(EnvironmentPointer environment=NULL)bio::chemical::EnvironmentDependent< T >inlineprotected
DependentMotif< BloodVessel, Vasculature >::EnvironmentDependent(EnvironmentPointer environment=NULL)bio::chemical::EnvironmentDependent< T >inline
bio::cellular::Tissue::EnvironmentDependent< Tissue >::EnvironmentDependent(EnvironmentPointer environment=NULL)bio::chemical::EnvironmentDependent< Tissue >inline
bio::cellular::Tissue::EnvironmentDependent< Organ >::EnvironmentDependent(EnvironmentPointer environment=NULL)bio::chemical::EnvironmentDependent< Organ >inline
bio::EnvironmentPointer typedefbio::chemical::EnvironmentDependent< Tissue >
bio::cellular::Tissue::EnvironmentDependent< Organ >::EnvironmentPointer typedefbio::chemical::EnvironmentDependent< Organ >
Class< Vasculature >::EnvironmentType typedefbio::chemical::EnvironmentDependent< T >protected
DependentMotif< BloodVessel, Vasculature >::EnvironmentType typedefbio::chemical::EnvironmentDependent< T >
bio::cellular::Tissue::EnvironmentDependent< Tissue >::EnvironmentType typedefbio::chemical::EnvironmentDependent< Tissue >
bio::cellular::Tissue::EnvironmentDependent< Organ >::EnvironmentType typedefbio::chemical::EnvironmentDependent< Organ >
Evict(Pointer< cellular::Cell > cell)bio::cellular::Tissue
ExpressGenes()bio::genetic::Expressorvirtual
Filterable()bio::physical::Filterable
Filterable(Filter filter)bio::physical::Filterable
ForEach(Pointer< ExcitationBase > excitation)bio::chemical::LinearStructureInterfaceinline
ForEachBond(BondVisitor visitor, void *context=NULL) constbio::chemical::Atom
ForEachBondMutable(BondMutator mutator, void *context=NULL)bio::chemical::Atom
ForEachImplementation(Pointer< const ExcitationBase > excitation)bio::chemical::LinearMotif< CONTENT_TYPE >inlineprotectedvirtual
FormBond(T toBond, BondType type=bond_type::Unknown())bio::chemical::Atominline
FormBondImplementation(Pointer< physical::Wave > toBond, AtomicNumber id, BondType type)bio::chemical::Atomvirtual
FormBondImplementation(Pointer< physical::Wave > toBond, AtomicNumber id, BondType type, bool ownsBonded)bio::chemical::Atom
FormBondImplementationLocked(Pointer< physical::Wave > toBond, AtomicNumber id, BondType type, bool ownsBonded)bio::chemical::Atom
Class< Vasculature >::GetAll()bio::chemical::UnorderedStructureInterfaceinline
Class< Vasculature >::GetAll() constbio::chemical::UnorderedStructureInterfaceinline
bio::cellular::Tissue::GetAll()bio::cellular::Tissueinline
bio::cellular::Tissue::GetAll() constbio::cellular::Tissueinline
GetAllBonds()bio::chemical::Atom
GetAllBonds() constbio::chemical::Atom
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::GetAllImplementation()bio::chemical::UnorderedMotif< TranscriptionFactor >inlinevirtual
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::GetAllImplementation() constbio::chemical::UnorderedMotif< TranscriptionFactor >inlinevirtual
bio::molecular::Vesicle::GetAllImplementation()bio::chemical::LinearMotif< CONTENT_TYPE >inlinevirtual
bio::molecular::Vesicle::GetAllImplementation() constbio::chemical::LinearMotif< CONTENT_TYPE >inlinevirtual
GetAllLike(Pointer< const Affinity > affinity) constbio::chemical::LinearStructureInterfaceinline
GetAllLikeImplementation(Pointer< const Affinity > affinity) constbio::chemical::LinearMotif< CONTENT_TYPE >inlineprotectedvirtual
GetAllSolutes()bio::chemical::Solutionprotectedvirtual
GetAllSolutes() constbio::chemical::Solutionprotectedvirtual
GetBlood()bio::circulatory::Vasculaturevirtual
GetBlood() constbio::circulatory::Vasculaturevirtual
GetBonded(Valence position)bio::chemical::Atom
GetBonded(Valence position) constbio::chemical::Atom
GetBondId()bio::chemical::Atominlinestatic
GetBondPosition(AtomicNumber bondedId) constbio::chemical::Atom
GetBondPosition(const Name &typeName) constbio::chemical::Atom
GetBondPosition() constbio::chemical::Atominline
GetBondPositionLocked(AtomicNumber bondedId) constbio::chemical::Atom
Class< Vasculature >::bio::GetBondType(Valence position) constbio::chemical::Atom
Class< Vasculature >::bio::GetBondType() constbio::chemical::Atominline
Class< Vasculature >::bio::molecular::Molecule::Metallic< chemical::DependentMotif< Surface, Molecule > >::GetBondType()bio::Metallic< chemical::DependentMotif< Surface, Molecule > >inlinestatic
bio::cellular::Tissue::Metallic< chemical::DependentMotif< Cell, Tissue > >::GetBondType()bio::Metallic< chemical::DependentMotif< Cell, Tissue > >inlinestatic
bio::cellular::Tissue::Metallic< chemical::DependentMotif< Tissue, Tissue > >::GetBondType()bio::Metallic< chemical::DependentMotif< Tissue, Tissue > >inlinestatic
GetById(const Id &id)bio::chemical::LinearStructureInterfaceinline
GetById(const Id &id) constbio::chemical::LinearStructureInterfaceinline
GetByIdImplementation(const Id &id)bio::chemical::LinearMotif< CONTENT_TYPE >inlineprotectedvirtual
GetByIdImplementation(const Id &id) constbio::chemical::LinearMotif< CONTENT_TYPE >inlineprotectedvirtual
GetByName(const Name &name)bio::chemical::LinearStructureInterfaceinline
GetByName(const Name &name) constbio::chemical::LinearStructureInterfaceinline
GetByNameImplementation(const Name &name)bio::chemical::LinearMotif< CONTENT_TYPE >inlineprotectedvirtual
GetByNameImplementation(const Name &name) constbio::chemical::LinearMotif< CONTENT_TYPE >inlineprotectedvirtual
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::GetClassProperties()bio::chemical::AbstractMotifstatic
Class< Vasculature >::bio::molecular::Vesicle::Class< Vasculature >::GetClassProperties()bio::chemical::LinearMotif< CONTENT_TYPE >inlinestatic
Class< Vasculature >::bio::physical::Periodic::GetClassProperties()bio::physical::Periodicstatic
DependentMotif< BloodVessel, Vasculature >::GetClassProperties()bio::chemical::LinearMotif< CONTENT_TYPE >inlinestatic
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::GetContentTypeId() constbio::chemical::AbstractMotifinlinevirtual
bio::molecular::Vesicle::GetContentTypeId() constbio::chemical::LinearMotif< CONTENT_TYPE >inlinevirtual
Class< Vasculature >::GetCount() constbio::chemical::UnorderedStructureInterfaceinline
bio::cellular::Tissue::GetCount() constbio::cellular::Tissueinline
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::GetCountImplementation() constbio::chemical::UnorderedMotif< TranscriptionFactor >inlinevirtual
bio::molecular::Vesicle::GetCountImplementation() constbio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inlinevirtual
GetDefaultInterval()bio::physical::Periodicstatic
Class< Vasculature >::bio::GetEnvironment()bio::molecular::Class< T >inline
Class< Vasculature >::bio::GetEnvironment() constbio::molecular::Class< T >inline
Class< Vasculature >::bio::molecular::Molecule::GetEnvironment()bio::molecular::Class< Molecule >inline
Class< Vasculature >::bio::molecular::Molecule::GetEnvironment() constbio::molecular::Class< Molecule >inline
Class< Vasculature >::bio::genetic::Expressor::GetEnvironment()bio::molecular::Class< T >inline
Class< Vasculature >::bio::genetic::Expressor::GetEnvironment() constbio::molecular::Class< T >inline
Class< Vasculature >::bio::genetic::Expressor::bio::molecular::Vesicle::Class< Vesicle >::GetEnvironment()bio::molecular::Class< Vesicle >inline
Class< Vasculature >::bio::molecular::Vesicle::GetEnvironment() constbio::molecular::Class< Vesicle >inline
Class< Vasculature >::bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::GetEnvironment()bio::chemical::EnvironmentDependent< T >inlinevirtual
Class< Vasculature >::bio::chemical::Solution::GetEnvironment() constbio::chemical::EnvironmentDependent< T >inlinevirtual
Class< Vasculature >::bio::molecular::Vesicle::GetEnvironment()bio::molecular::Class< Vesicle >inline
Class< Vasculature >::bio::molecular::Vesicle::GetEnvironment() constbio::molecular::Class< Vesicle >inline
bio::cellular::Tissue::GetEnvironment()bio::molecular::Class< T >inline
bio::cellular::Tissue::GetEnvironment() constbio::molecular::Class< T >inline
bio::cellular::Tissue::EnvironmentDependent< Tissue >::GetEnvironment()bio::chemical::EnvironmentDependent< Tissue >inlinevirtual
bio::EnvironmentDependent< Tissue >::GetEnvironment() constbio::chemical::EnvironmentDependent< Tissue >inlinevirtual
bio::cellular::Tissue::EnvironmentDependent< Organ >::GetEnvironment()bio::chemical::EnvironmentDependent< Organ >inlinevirtual
EnvironmentDependent< Organ >::GetEnvironment() constbio::chemical::EnvironmentDependent< Organ >inlinevirtual
GetExpressedProteinByName(const Name &proteinName)bio::genetic::Expressorinline
GetFilter() constbio::physical::Filterable
GetId() constbio::physical::Identifiable< Id >inlinevirtual
GetInterval() constbio::physical::Periodic
GetIntervalInSeconds() constbio::physical::Periodic
GetName() constbio::physical::Identifiable< Id >inlinevirtual
GetNumMatching(Pointer< const Container > other) constbio::chemical::UnorderedStructureInterfaceinline
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::GetNumMatchingImplementation(Pointer< const Container > other) constbio::chemical::UnorderedMotif< TranscriptionFactor >inlinevirtual
bio::molecular::Vesicle::GetNumMatchingImplementation(Pointer< const Container > other) constbio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inlinevirtual
GetOrCreateById(Id id)bio::chemical::LinearStructureInterfaceinline
GetOrCreateByIdImplementation(const Id &id)bio::chemical::LinearMotif< CONTENT_TYPE >inlineprotectedvirtual
GetOrCreateByName(const Name &name)bio::chemical::LinearStructureInterfaceinline
GetOrCreateByNameImplementation(const Name &name)bio::chemical::LinearMotif< CONTENT_TYPE >inlineprotectedvirtual
GetPerspective() constbio::physical::Observer< PERSPECTIVE >inlinevirtual
Class< Vasculature >::bio::GetProperties() constbio::chemical::Class< T >inlinevirtual
Class< Vasculature >::bio::chemical::Substance::GetProperties() constbio::chemical::Class< Substance >inlinevirtual
Class< Vasculature >::bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::Class< Solution >::GetProperties() constbio::chemical::Class< Solution >inlinevirtual
Class< Vasculature >::bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::DependentMotif< Solute, Solution >::bio::chemical::LinearMotif::Class< LinearMotif< CONTENT_TYPE > >::GetProperties() constbio::chemical::Class< LinearMotif< CONTENT_TYPE > >inlinevirtual
bio::physical::Periodic::GetProperties() constbio::physical::Periodicvirtual
bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(ConstWaves waves)bio::physical::Wavestatic
bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(Pointer< const Wave > wave1, Pointer< const Wave > wave2)bio::physical::Wavestatic
bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(Pointer< const Wave > wave, const Properties &properties)bio::physical::Wavestatic
Identifiable< Id >::bio::bio::bio::bio::bio::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(ConstWaves waves)bio::physical::Wavestatic
Identifiable< Id >::bio::bio::bio::bio::bio::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(Pointer< const Wave > wave1, Pointer< const Wave > wave2)bio::physical::Wavestatic
Identifiable< Id >::bio::bio::bio::bio::bio::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(Pointer< const Wave > wave, const Properties &properties)bio::physical::Wavestatic
bio::log::Writer::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(ConstWaves waves)bio::physical::Wavestatic
bio::log::Writer::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(Pointer< const Wave > wave1, Pointer< const Wave > wave2)bio::physical::Wavestatic
bio::log::Writer::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(Pointer< const Wave > wave, const Properties &properties)bio::physical::Wavestatic
bio::chemical::Atom::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(ConstWaves waves)bio::physical::Wavestatic
bio::chemical::Atom::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(Pointer< const Wave > wave1, Pointer< const Wave > wave2)bio::physical::Wavestatic
bio::chemical::Atom::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(Pointer< const Wave > wave, const Properties &properties)bio::physical::Wavestatic
bio::chemical::Substance::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(ConstWaves waves)bio::physical::Wavestatic
bio::chemical::Substance::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(Pointer< const Wave > wave1, Pointer< const Wave > wave2)bio::physical::Wavestatic
bio::chemical::Substance::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(Pointer< const Wave > wave, const Properties &properties)bio::physical::Wavestatic
bio::molecular::Molecule::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(ConstWaves waves)bio::physical::Wavestatic
bio::molecular::Molecule::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(Pointer< const Wave > wave1, Pointer< const Wave > wave2)bio::physical::Wavestatic
bio::molecular::Molecule::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(Pointer< const Wave > wave, const Properties &properties)bio::physical::Wavestatic
bio::genetic::Expressor::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(ConstWaves waves)bio::physical::Wavestatic
bio::genetic::Expressor::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(Pointer< const Wave > wave1, Pointer< const Wave > wave2)bio::physical::Wavestatic
bio::genetic::Expressor::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(Pointer< const Wave > wave, const Properties &properties)bio::physical::Wavestatic
UnorderedMotif< TranscriptionFactor >::bio::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(ConstWaves waves)bio::physical::Wavestatic
UnorderedMotif< TranscriptionFactor >::bio::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(Pointer< const Wave > wave1, Pointer< const Wave > wave2)bio::physical::Wavestatic
UnorderedMotif< TranscriptionFactor >::bio::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(Pointer< const Wave > wave, const Properties &properties)bio::physical::Wavestatic
bio::physical::Periodic::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(ConstWaves waves)bio::physical::Wavestatic
bio::physical::Periodic::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(Pointer< const Wave > wave1, Pointer< const Wave > wave2)bio::physical::Wavestatic
bio::physical::Periodic::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(Pointer< const Wave > wave, const Properties &properties)bio::physical::Wavestatic
bio::molecular::Vesicle::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(ConstWaves waves)bio::physical::Wavestatic
bio::molecular::Vesicle::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(Pointer< const Wave > wave1, Pointer< const Wave > wave2)bio::physical::Wavestatic
bio::molecular::Vesicle::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetResonanceBetween(Pointer< const Wave > wave, const Properties &properties)bio::physical::Wavestatic
DependentMotif< BloodVessel, Vasculature >::GetResonanceBetween(ConstWaves waves)bio::physical::Wavestatic
DependentMotif< BloodVessel, Vasculature >::GetResonanceBetween(Pointer< const Wave > wave1, Pointer< const Wave > wave2)bio::physical::Wavestatic
DependentMotif< BloodVessel, Vasculature >::GetResonanceBetween(Pointer< const Wave > wave, const Properties &properties)bio::physical::Wavestatic
bio::chemical::LinearMotif::DependentMotif< BloodVessel, Vasculature >::DependentMotif< BloodVessel, Vasculature >::GetResonanceBetween(ConstWaves waves)bio::physical::Wavestatic
bio::chemical::LinearMotif::DependentMotif< BloodVessel, Vasculature >::DependentMotif< BloodVessel, Vasculature >::GetResonanceBetween(Pointer< const Wave > wave1, Pointer< const Wave > wave2)bio::physical::Wavestatic
bio::chemical::LinearMotif::DependentMotif< BloodVessel, Vasculature >::DependentMotif< BloodVessel, Vasculature >::GetResonanceBetween(Pointer< const Wave > wave, const Properties &properties)bio::physical::Wavestatic
UnorderedMotif< Pointer< CONTENT_TYPE > >::DependentMotif< BloodVessel, Vasculature >::GetResonanceBetween(ConstWaves waves)bio::physical::Wavestatic
UnorderedMotif< Pointer< CONTENT_TYPE > >::DependentMotif< BloodVessel, Vasculature >::GetResonanceBetween(Pointer< const Wave > wave1, Pointer< const Wave > wave2)bio::physical::Wavestatic
UnorderedMotif< Pointer< CONTENT_TYPE > >::DependentMotif< BloodVessel, Vasculature >::GetResonanceBetween(Pointer< const Wave > wave, const Properties &properties)bio::physical::Wavestatic
bio::cellular::Tissue::GetResonanceBetween(ConstWaves waves)bio::physical::Wavestatic
bio::cellular::Tissue::GetResonanceBetween(Pointer< const Wave > wave1, Pointer< const Wave > wave2)bio::physical::Wavestatic
bio::cellular::Tissue::GetResonanceBetween(Pointer< const Wave > wave, const Properties &properties)bio::physical::Wavestatic
GetStringFrom(std::string separator=", ")bio::chemical::UnorderedStructureInterfaceinline
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::GetStringFromImplementation(String separator=", ")bio::chemical::UnorderedMotif< TranscriptionFactor >inlinevirtual
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::bio::chemical::AbstractMotif::GetStringFromImplementation(std::string separator=", ")bio::chemical::AbstractMotifinline
bio::molecular::Vesicle::Class< Vasculature >::GetStringFromImplementation(std::string separator=", ")bio::chemical::LinearMotif< CONTENT_TYPE >inline
Class< Vasculature >::UnorderedMotif< Pointer< CONTENT_TYPE > >::GetStringFromImplementation(String separator=", ")bio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inlinevirtual
DependentMotif< BloodVessel, Vasculature >::GetStringFromImplementation(std::string separator=", ")bio::chemical::LinearMotif< CONTENT_TYPE >inline
bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetSymmetry() constbio::physical::Wave
Identifiable< Id >::bio::bio::bio::bio::bio::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetSymmetry() constbio::physical::Wave
bio::log::Writer::Class< Writer >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetSymmetry() constbio::physical::Wave
bio::chemical::Atom::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetSymmetry() constbio::physical::Wave
bio::chemical::Substance::bio::Class< Substance >::Class< Substance >::Class< Substance >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetSymmetry() constbio::physical::Wave
bio::molecular::Molecule::bio::Class< Molecule >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetSymmetry() constbio::physical::Wave
bio::genetic::Expressor::bio::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetSymmetry() constbio::physical::Wave
bio::genetic::Expressor::UnorderedMotif< TranscriptionFactor >::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetSymmetry() constbio::physical::Wave
bio::physical::Periodic::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetSymmetry() constbio::physical::Wave
bio::molecular::Vesicle::bio::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetSymmetry() constbio::physical::Wave
DependentMotif< BloodVessel, Vasculature >::bio::GetSymmetry() constbio::physical::Wave
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::bio::Class< LinearMotif< CONTENT_TYPE > >::Class< LinearMotif< CONTENT_TYPE > >::Class< LinearMotif< CONTENT_TYPE > >::Class< LinearMotif< CONTENT_TYPE > >::GetSymmetry() constbio::physical::Wave
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::UnorderedMotif< Pointer< CONTENT_TYPE > >::bio::GetSymmetry() constbio::physical::Wave
bio::cellular::Tissue::bio::Class< Tissue >::Class< Tissue >::GetSymmetry() constbio::physical::Wave
GetTimeLastCrested() constbio::physical::Periodic
bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetTypeId() constbio::physical::Waveinline
Identifiable< Id >::bio::bio::bio::bio::bio::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetTypeId() constbio::physical::Waveinline
bio::log::Writer::Class< Writer >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetTypeId() constbio::physical::Waveinline
bio::chemical::Atom::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetTypeId() constbio::physical::Waveinline
bio::chemical::Substance::bio::Class< Substance >::Class< Substance >::Class< Substance >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetTypeId() constbio::physical::Waveinline
bio::molecular::Molecule::bio::Class< Molecule >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetTypeId() constbio::physical::Waveinline
bio::genetic::Expressor::bio::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetTypeId() constbio::physical::Waveinline
bio::genetic::Expressor::UnorderedMotif< TranscriptionFactor >::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetTypeId() constbio::physical::Waveinline
bio::physical::Periodic::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetTypeId() constbio::physical::Waveinline
bio::molecular::Vesicle::bio::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::GetTypeId() constbio::physical::Waveinline
DependentMotif< BloodVessel, Vasculature >::bio::GetTypeId() constbio::physical::Waveinline
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::bio::Class< LinearMotif< CONTENT_TYPE > >::Class< LinearMotif< CONTENT_TYPE > >::Class< LinearMotif< CONTENT_TYPE > >::Class< LinearMotif< CONTENT_TYPE > >::GetTypeId() constbio::physical::Waveinline
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::UnorderedMotif< Pointer< CONTENT_TYPE > >::bio::GetTypeId() constbio::physical::Waveinline
bio::cellular::Tissue::bio::Class< Tissue >::Class< Tissue >::GetTypeId() constbio::physical::Waveinline
Class< Vasculature >::bio::GetWaveObject()bio::physical::Class< T >inlinevirtual
Class< Vasculature >::bio::GetWaveObject() constbio::physical::Class< T >inlinevirtual
Class< Vasculature >::bio::log::Writer::Class< Writer >::GetWaveObject()bio::physical::Class< Writer >inlinevirtual
Class< Vasculature >::bio::log::Writer::GetWaveObject() constbio::physical::Class< Writer >inlinevirtual
Class< Vasculature >::bio::log::Writer::bio::physical::Filterable::GetWaveObject()bio::physical::Class< Filterable >inlinevirtual
Class< Vasculature >::bio::physical::Filterable::GetWaveObject() constbio::physical::Class< Filterable >inlinevirtual
Class< Vasculature >::bio::chemical::Atom::GetWaveObject()bio::physical::Class< Atom >inlinevirtual
Class< Vasculature >::bio::chemical::Atom::GetWaveObject() constbio::physical::Class< Atom >inlinevirtual
bio::physical::Periodic::GetWaveObject()bio::physical::Class< Periodic >inlinevirtual
bio::physical::Periodic::GetWaveObject() constbio::physical::Class< Periodic >inlinevirtual
Class< Vasculature >::Has(T content) constbio::chemical::UnorderedStructureInterfaceinline
Class< Vasculature >::Has(Pointer< T > content) constbio::chemical::UnorderedStructureInterfaceinline
bio::cellular::Tissue::Has(const T t) constbio::cellular::Tissueinline
HasAll(Pointer< const Container > contents) constbio::chemical::UnorderedStructureInterfaceinline
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::HasAllImplementation(Pointer< const Container > contents) constbio::chemical::UnorderedMotif< TranscriptionFactor >inlinevirtual
bio::molecular::Vesicle::HasAllImplementation(Pointer< const Container > contents) constbio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inlinevirtual
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::HasImplementation(const TranscriptionFactor content) constbio::chemical::UnorderedMotif< TranscriptionFactor >inlinevirtual
bio::molecular::Vesicle::HasImplementation(const ContentPointer &content) constbio::chemical::LinearMotif< CONTENT_TYPE >inlinevirtual
UnorderedMotif< Pointer< CONTENT_TYPE > >::HasImplementation(const Pointer< CONTENT_TYPE > content) constbio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inlinevirtual
Identifiable(Pointer< Perspective< Id > > perspective=NULL)bio::physical::Identifiable< Id >inlineexplicit
Identifiable(const Name &name, Pointer< Perspective< Id > > perspective=NULL)bio::physical::Identifiable< Id >inlineexplicit
Identifiable(Identifier id, Pointer< Perspective< Id > > perspective=NULL)bio::physical::Identifiable< Id >inlineexplicit
Identifiable(const Identifiable &other)bio::physical::Identifiable< Id >inline
Identifier typedefbio::physical::Identifiable< Id >
Ids typedefbio::physical::Identifiable< Id >
Import(Pointer< const UnorderedMotif< T > > other)bio::chemical::UnorderedStructureInterfaceinline
Import(Pointer< const LinearMotif< T > > other)bio::chemical::UnorderedStructureInterfaceinline
Import(const ::bio::Arrangement< T > &other)bio::chemical::UnorderedStructureInterfaceinline
ImportAll(Pointer< const physical::Wave > other)bio::chemical::UnorderedStructureInterfaceinline
ImportAllCollectVisitor(const chemical::Bond &bond, void *ctx)bio::chemical::UnorderedStructureInterfaceinlinestatic
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::ImportImplementation(Pointer< const UnorderedMotif< TranscriptionFactor > > other)bio::chemical::UnorderedMotif< TranscriptionFactor >inlinevirtual
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::ImportImplementation(const void *other)bio::chemical::UnorderedMotif< TranscriptionFactor >inlinevirtual
bio::molecular::Vesicle::ImportImplementation(Pointer< const LinearMotif< CONTENT_TYPE > > other)bio::chemical::LinearMotif< CONTENT_TYPE >inlinevirtual
bio::molecular::Vesicle::ImportImplementation(const void *other)bio::chemical::LinearMotif< CONTENT_TYPE >inlinevirtual
UnorderedMotif< Pointer< CONTENT_TYPE > >::ImportImplementation(Pointer< const UnorderedMotif< Pointer< CONTENT_TYPE > > > other)bio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inlinevirtual
IndexBond(AtomicNumber bondedId, Valence position)bio::chemical::Atomprotected
Influx(const Solute &toInflux)bio::chemical::Solutionprotectedvirtual
bio::Initialize(ByteStreams &args)bio::VirtualBaseprotected
bio::Initialize(ByteStream arg1)bio::VirtualBaseprotected
bio::Initialize(ByteStream arg1, ByteStream arg2)bio::VirtualBaseprotected
bio::Initialize(ByteStream arg1, ByteStream arg2, ByteStream arg3)bio::VirtualBaseprotected
bio::physical::Periodic::Initialize(ByteStreams &args)bio::VirtualBaseprotected
bio::physical::Periodic::Initialize(ByteStream arg1)bio::VirtualBaseprotected
bio::physical::Periodic::Initialize(ByteStream arg1, ByteStream arg2)bio::VirtualBaseprotected
bio::physical::Periodic::Initialize(ByteStream arg1, ByteStream arg2, ByteStream arg3)bio::VirtualBaseprotected
Class< Vasculature >::bio::Identifiable< Id >::InitializeImplementation(ByteStreams &args)bio::physical::Identifiable< Id >inlineprotectedvirtual
Class< Vasculature >::bio::log::Writer::InitializeImplementation(ByteStreams &args)bio::physical::Filterablevirtual
bio::physical::Periodic::InitializeImplementation(ByteStreams &args)bio::physical::Periodicvirtual
Insert(typename LinearStructureRequest< T >::PointerType toAdd, const Position position=BOTTOM, const Id optionalPositionArg=0, const bool transferSubContents=false)bio::chemical::LinearStructureInterfaceinline
Class< Vasculature >::InsertImplementation(ContentPointer toAdd, const Position position=BOTTOM, const Id optionalPositionArg=0, const bool transferSubContents=false)bio::chemical::DependentMotif< Solute, Solution >inlineprotectedvirtual
Class< Vasculature >::bio::chemical::LinearMotif::InsertImplementation(ContentPointer toAdd, const Position position=BOTTOM, const Id optionalPositionArg=0, const bool transferSubContents=false)bio::chemical::LinearMotif< CONTENT_TYPE >inlineprotectedvirtual
DependentMotif< BloodVessel, Vasculature >::InsertImplementation(ContentPointer toAdd, const Position position=BOTTOM, const Id optionalPositionArg=0, const bool transferSubContents=false)bio::chemical::DependentMotif< BloodVessel, Vasculature >inlinevirtual
Class< Vasculature >::bio::IsEnabled(LogLevel level) constbio::log::Writer
bio::chemical::Substance::IsEnabled() constbio::chemical::Substancevirtual
IsId(Identifier id) constbio::physical::Identifiable< Id >inlinevirtual
IsName(const Name &name) constbio::physical::Identifiable< Id >inlinevirtual
IsNameInsensitive(const Name &name) constbio::physical::Identifiable< Id >inlinevirtual
IsWithinTissue(const Id &tissueId) constbio::cellular::Tissuevirtual
IsWithinTissue(const Name &name) constbio::cellular::Tissuevirtual
Class< Vasculature >::LinearMotif()bio::chemical::LinearMotif< CONTENT_TYPE >inlineexplicitprotected
Class< Vasculature >::LinearMotif(const Contents *contents)bio::chemical::LinearMotif< CONTENT_TYPE >inlineexplicitprotected
Class< Vasculature >::LinearMotif(const LinearMotif< CONTENT_TYPE > &toCopy)bio::chemical::LinearMotif< CONTENT_TYPE >inlineprotected
DependentMotif< BloodVessel, Vasculature >::LinearMotif()bio::chemical::LinearMotif< CONTENT_TYPE >inlineexplicit
DependentMotif< BloodVessel, Vasculature >::LinearMotif(const Contents *contents)bio::chemical::LinearMotif< CONTENT_TYPE >inlineexplicit
DependentMotif< BloodVessel, Vasculature >::LinearMotif(const LinearMotif< CONTENT_TYPE > &toCopy)bio::chemical::LinearMotif< CONTENT_TYPE >inline
LinearStructureInterface()bio::chemical::LinearStructureInterfaceinline
bio::LockMutexShared() constbio::ThreadSafe
bio::ThreadSafe::LockMutexShared() constbio::ThreadSafe
bio::LockThread() constbio::ThreadSafe
bio::ThreadSafe::LockThread() constbio::ThreadSafe
Class< Vasculature >::bio::Log(LogLevel level, const char *format, va_list args) constbio::log::Writervirtual
Class< Vasculature >::bio::Log(Pointer< const Writer > writer, LogLevel level, const char *format,...)bio::log::Writerstatic
bio::chemical::Substance::bio::chemical::Structure::Log(const LogLevel &level=log_level::Info(), const Filter &filter=FilterPerspective::InvalidId())bio::chemical::UnorderedStructureInterfaceinline
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::LogImplementation(const LogLevel &level=log_level::Info(), const Filter &filter=FilterPerspective::InvalidId())bio::chemical::UnorderedMotif< TranscriptionFactor >inlinevirtual
bio::molecular::Vesicle::LogImplementation(const LogLevel &level=log_level::Info(), const Filter &filter=FilterPerspective::InvalidId())bio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inlinevirtual
MakePeriodicSymmetry()bio::physical::Periodicstatic
mBackflowPreventerbio::chemical::Atomprotected
mBloodbio::circulatory::Vasculatureprotected
mBondIndexbio::chemical::Atomprotected
mBondsbio::chemical::Atomprotected
Class< Vasculature >::mcApoptosisbio::cellular::Class< T >protected
bio::cellular::Tissue::mcApoptosisbio::cellular::Class< Tissue >protected
Class< Vasculature >::mcCrestbio::cellular::Class< T >protected
bio::cellular::Tissue::mcCrestbio::cellular::Class< Tissue >protected
Class< Vasculature >::mContentIdbio::chemical::LinearMotif< CONTENT_TYPE >mutableprotected
DependentMotif< BloodVessel, Vasculature >::mContentIdbio::chemical::LinearMotif< CONTENT_TYPE >mutable
UnorderedMotif< TranscriptionFactor >::Class< Vasculature >::mContentsbio::chemical::AbstractMotifmutableprotected
bio::molecular::Vesicle::Class< Vasculature >::mContentsbio::chemical::AbstractMotifmutableprotected
DependentMotif< BloodVessel, Vasculature >::mContentsbio::chemical::AbstractMotifmutableprotected
Class< Vasculature >::mEnvironmentbio::chemical::EnvironmentDependent< T >protected
DependentMotif< BloodVessel, Vasculature >::mEnvironmentbio::chemical::EnvironmentDependent< T >protected
bio::cellular::Tissue::EnvironmentDependent< Tissue >::mEnvironmentbio::chemical::EnvironmentDependent< Tissue >protected
bio::cellular::Tissue::EnvironmentDependent< Organ >::mEnvironmentbio::chemical::EnvironmentDependent< Organ >protected
Class< Vasculature >::Metallic()bio::Metallic< chemical::DependentMotif< Surface, Molecule > >inline
Class< Vasculature >::Metallic(const Metallic &other)bio::Metallic< chemical::DependentMotif< Surface, Molecule > >inline
bio::cellular::Tissue::Metallic< chemical::DependentMotif< Cell, Tissue > >::Metallic()bio::Metallic< chemical::DependentMotif< Cell, Tissue > >inline
bio::Metallic< chemical::DependentMotif< Cell, Tissue > >::Metallic(const Metallic &other)bio::Metallic< chemical::DependentMotif< Cell, Tissue > >inline
bio::cellular::Tissue::Metallic< chemical::DependentMotif< Tissue, Tissue > >::Metallic()bio::Metallic< chemical::DependentMotif< Tissue, Tissue > >inline
Metallic< chemical::DependentMotif< Tissue, Tissue > >::Metallic(const Metallic &other)bio::Metallic< chemical::DependentMotif< Tissue, Tissue > >inline
mFilterbio::physical::Filterableprotected
bio::mHasBeenInitializedbio::VirtualBaseprotected
bio::physical::Periodic::mHasBeenInitializedbio::VirtualBaseprotected
bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mHasSignalbio::physical::Waveprotected
Identifiable< Id >::bio::bio::bio::bio::bio::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mHasSignalbio::physical::Waveprotected
bio::log::Writer::Class< Writer >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mHasSignalbio::physical::Waveprotected
bio::chemical::Atom::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mHasSignalbio::physical::Waveprotected
bio::chemical::Substance::bio::Class< Substance >::Class< Substance >::Class< Substance >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mHasSignalbio::physical::Waveprotected
bio::molecular::Molecule::bio::Class< Molecule >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mHasSignalbio::physical::Waveprotected
bio::genetic::Expressor::bio::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mHasSignalbio::physical::Waveprotected
bio::genetic::Expressor::UnorderedMotif< TranscriptionFactor >::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mHasSignalbio::physical::Waveprotected
bio::physical::Periodic::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mHasSignalbio::physical::Waveprotected
bio::molecular::Vesicle::bio::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mHasSignalbio::physical::Waveprotected
DependentMotif< BloodVessel, Vasculature >::bio::mHasSignalbio::physical::Waveprotected
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::bio::Class< LinearMotif< CONTENT_TYPE > >::Class< LinearMotif< CONTENT_TYPE > >::Class< LinearMotif< CONTENT_TYPE > >::Class< LinearMotif< CONTENT_TYPE > >::mHasSignalbio::physical::Waveprotected
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::UnorderedMotif< Pointer< CONTENT_TYPE > >::bio::mHasSignalbio::physical::Waveprotected
bio::cellular::Tissue::bio::Class< Tissue >::Class< Tissue >::mHasSignalbio::physical::Waveprotected
mIntervalbio::physical::Periodicprotected
mLastCrestTimestampbio::physical::Periodicprotected
Class< Vasculature >::bio::Class< Vasculature >::Class< Vasculature >::mObjectbio::physical::Class< T >mutableprotected
Class< Vasculature >::bio::Identifiable< Id >::bio::Class< Vasculature >::mObjectbio::physical::Class< T >mutableprotected
Class< Vasculature >::bio::log::Writer::Class< Writer >::mObjectbio::physical::Class< Writer >mutableprotected
Class< Vasculature >::bio::log::Writer::bio::physical::Filterable::mObjectbio::physical::Class< Filterable >mutableprotected
Class< Vasculature >::bio::chemical::Atom::mObjectbio::physical::Class< Atom >mutableprotected
Class< Vasculature >::bio::chemical::Substance::Class< Substance >::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mObjectbio::physical::Class< T >mutableprotected
Class< Vasculature >::bio::molecular::Molecule::Class< Molecule >::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mObjectbio::physical::Class< T >mutableprotected
Class< Vasculature >::bio::genetic::Expressor::Class< Expressor >::bio::Class< Expressor >::Class< Expressor >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mObjectbio::physical::Class< T >mutableprotected
Class< Vasculature >::bio::genetic::Expressor::UnorderedMotif< TranscriptionFactor >::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mObjectbio::physical::Class< T >mutableprotected
Class< Vasculature >::bio::physical::Periodic::mObjectbio::physical::Class< Periodic >mutableprotected
bio::molecular::Vesicle::Class< Vesicle >::bio::Class< Vesicle >::Class< Vesicle >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mObjectbio::physical::Class< T >mutableprotected
DependentMotif< BloodVessel, Vasculature >::bio::mObjectbio::physical::Class< T >mutableprotected
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::Class< LinearMotif< CONTENT_TYPE > >::bio::Class< LinearMotif< CONTENT_TYPE > >::Class< LinearMotif< CONTENT_TYPE > >::mObjectbio::physical::Class< T >mutableprotected
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::UnorderedMotif< Pointer< CONTENT_TYPE > >::bio::mObjectbio::physical::Class< T >mutableprotected
bio::cellular::Tissue::Class< Tissue >::bio::mObjectbio::physical::Class< T >mutableprotected
Class< Vasculature >::bio::Modulate(Pointer< ::bio::physical::Wave > signal)bio::chemical::Class< T >inlinevirtual
Class< Vasculature >::bio::physical::Class::Modulate(Pointer< Wave > signal)bio::physical::Wavevirtual
Class< Vasculature >::bio::chemical::Substance::Modulate(Pointer< ::bio::physical::Wave > signal)bio::chemical::Class< Substance >inlinevirtual
Class< Vasculature >::bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::Class< Solution >::Modulate(Pointer< ::bio::physical::Wave > signal)bio::chemical::Class< Solution >inlinevirtual
bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::DependentMotif< Solute, Solution >::bio::chemical::LinearMotif::Class< LinearMotif< CONTENT_TYPE > >::Modulate(Pointer< ::bio::physical::Wave > signal)bio::chemical::Class< LinearMotif< CONTENT_TYPE > >inlinevirtual
bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mSymmetrybio::physical::Wavemutableprotected
Identifiable< Id >::bio::bio::bio::bio::bio::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mSymmetrybio::physical::Wavemutableprotected
bio::log::Writer::Class< Writer >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mSymmetrybio::physical::Wavemutableprotected
bio::chemical::Atom::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mSymmetrybio::physical::Wavemutableprotected
bio::chemical::Substance::bio::Class< Substance >::Class< Substance >::Class< Substance >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mSymmetrybio::physical::Wavemutableprotected
bio::molecular::Molecule::bio::Class< Molecule >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mSymmetrybio::physical::Wavemutableprotected
bio::genetic::Expressor::bio::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mSymmetrybio::physical::Wavemutableprotected
bio::genetic::Expressor::UnorderedMotif< TranscriptionFactor >::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mSymmetrybio::physical::Wavemutableprotected
bio::physical::Periodic::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mSymmetrybio::physical::Wavemutableprotected
bio::molecular::Vesicle::bio::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mSymmetrybio::physical::Wavemutableprotected
DependentMotif< BloodVessel, Vasculature >::bio::mSymmetrybio::physical::Wavemutableprotected
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::bio::Class< LinearMotif< CONTENT_TYPE > >::Class< LinearMotif< CONTENT_TYPE > >::Class< LinearMotif< CONTENT_TYPE > >::Class< LinearMotif< CONTENT_TYPE > >::mSymmetrybio::physical::Wavemutableprotected
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::UnorderedMotif< Pointer< CONTENT_TYPE > >::bio::mSymmetrybio::physical::Wavemutableprotected
bio::cellular::Tissue::bio::Class< Tissue >::Class< Tissue >::mSymmetrybio::physical::Wavemutableprotected
Class< Vasculature >::bio::Covalent< UnorderedMotif< Property > >::mTbio::Covalent< UnorderedMotif< Property > >protected
Class< Vasculature >::bio::Covalent< UnorderedMotif< State > >::mTbio::Covalent< UnorderedMotif< State > >protected
Class< Vasculature >::bio::molecular::Molecule::Metallic< chemical::DependentMotif< Surface, Molecule > >::mTbio::Metallic< chemical::DependentMotif< Surface, Molecule > >protected
Class< Vasculature >::bio::genetic::Expressor::Covalent< chemical::LinearMotif< Plasmid > >::mTbio::Covalent< chemical::LinearMotif< Plasmid > >protected
Class< Vasculature >::bio::genetic::Expressor::Covalent< chemical::LinearMotif< molecular::Protein > >::mTbio::Covalent< chemical::LinearMotif< molecular::Protein > >protected
bio::cellular::Tissue::Metallic< chemical::DependentMotif< Cell, Tissue > >::mTbio::Metallic< chemical::DependentMotif< Cell, Tissue > >protected
bio::cellular::Tissue::Metallic< chemical::DependentMotif< Tissue, Tissue > >::mTbio::Metallic< chemical::DependentMotif< Tissue, Tissue > >protected
mTranscriptomebio::genetic::Expressorprotected
bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mTypeIdbio::physical::Waveprotected
Identifiable< Id >::bio::bio::bio::bio::bio::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mTypeIdbio::physical::Waveprotected
bio::log::Writer::Class< Writer >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mTypeIdbio::physical::Waveprotected
bio::chemical::Atom::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mTypeIdbio::physical::Waveprotected
bio::chemical::Substance::bio::Class< Substance >::Class< Substance >::Class< Substance >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mTypeIdbio::physical::Waveprotected
bio::molecular::Molecule::bio::Class< Molecule >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mTypeIdbio::physical::Waveprotected
bio::genetic::Expressor::bio::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mTypeIdbio::physical::Waveprotected
bio::genetic::Expressor::UnorderedMotif< TranscriptionFactor >::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mTypeIdbio::physical::Waveprotected
bio::physical::Periodic::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mTypeIdbio::physical::Waveprotected
bio::molecular::Vesicle::bio::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::mTypeIdbio::physical::Waveprotected
DependentMotif< BloodVessel, Vasculature >::bio::mTypeIdbio::physical::Waveprotected
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::bio::Class< LinearMotif< CONTENT_TYPE > >::Class< LinearMotif< CONTENT_TYPE > >::Class< LinearMotif< CONTENT_TYPE > >::Class< LinearMotif< CONTENT_TYPE > >::mTypeIdbio::physical::Waveprotected
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::UnorderedMotif< Pointer< CONTENT_TYPE > >::bio::mTypeIdbio::physical::Waveprotected
bio::cellular::Tissue::bio::Class< Tissue >::Class< Tissue >::mTypeIdbio::physical::Waveprotected
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::NewContents(Index expectedSize)bio::chemical::UnorderedMotif< TranscriptionFactor >inlinestatic
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::NewContents(const Contents &contents)bio::chemical::UnorderedMotif< TranscriptionFactor >inlinestatic
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::NewContents(Pointer< const Container > contents)bio::chemical::UnorderedMotif< TranscriptionFactor >inlinestatic
bio::molecular::Vesicle::Class< Vasculature >::NewContents(Index expectedSize)bio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inlinestatic
bio::molecular::Vesicle::Class< Vasculature >::NewContents(const Contents &contents)bio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inlinestatic
bio::molecular::Vesicle::Class< Vasculature >::NewContents(Pointer< const Container > contents)bio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inlinestatic
DependentMotif< BloodVessel, Vasculature >::NewContents(Index expectedSize)bio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inlinestatic
DependentMotif< BloodVessel, Vasculature >::NewContents(const Contents &contents)bio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inlinestatic
DependentMotif< BloodVessel, Vasculature >::NewContents(Pointer< const Container > contents)bio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inlinestatic
Class< Vasculature >::bio::Covalent< UnorderedMotif< Property > >::Object()bio::Covalent< UnorderedMotif< Property > >inline
Class< Vasculature >::bio::Covalent< UnorderedMotif< Property > >::Object() constbio::Covalent< UnorderedMotif< Property > >inline
Class< Vasculature >::bio::Covalent< UnorderedMotif< State > >::Object()bio::Covalent< UnorderedMotif< State > >inline
Class< Vasculature >::bio::Covalent< UnorderedMotif< State > >::Object() constbio::Covalent< UnorderedMotif< State > >inline
Class< Vasculature >::bio::molecular::Molecule::Metallic< chemical::DependentMotif< Surface, Molecule > >::Object()bio::Metallic< chemical::DependentMotif< Surface, Molecule > >inline
Class< Vasculature >::bio::Metallic< chemical::DependentMotif< Surface, Molecule > >::Object() constbio::Metallic< chemical::DependentMotif< Surface, Molecule > >inline
Class< Vasculature >::bio::genetic::Expressor::Covalent< chemical::LinearMotif< Plasmid > >::Object()bio::Covalent< chemical::LinearMotif< Plasmid > >inline
Class< Vasculature >::bio::Covalent< chemical::LinearMotif< Plasmid > >::Object() constbio::Covalent< chemical::LinearMotif< Plasmid > >inline
Class< Vasculature >::bio::genetic::Expressor::Covalent< chemical::LinearMotif< molecular::Protein > >::Object()bio::Covalent< chemical::LinearMotif< molecular::Protein > >inline
Class< Vasculature >::Covalent< chemical::LinearMotif< molecular::Protein > >::Object() constbio::Covalent< chemical::LinearMotif< molecular::Protein > >inline
bio::cellular::Tissue::Metallic< chemical::DependentMotif< Cell, Tissue > >::Object()bio::Metallic< chemical::DependentMotif< Cell, Tissue > >inline
bio::Metallic< chemical::DependentMotif< Cell, Tissue > >::Object() constbio::Metallic< chemical::DependentMotif< Cell, Tissue > >inline
bio::cellular::Tissue::Metallic< chemical::DependentMotif< Tissue, Tissue > >::Object()bio::Metallic< chemical::DependentMotif< Tissue, Tissue > >inline
Metallic< chemical::DependentMotif< Tissue, Tissue > >::Object() constbio::Metallic< chemical::DependentMotif< Tissue, Tissue > >inline
Observer(Pointer< Perspective > perspective=NULL)bio::physical::Observer< PERSPECTIVE >inlineexplicit
Observer(const Observer &other)bio::physical::Observer< PERSPECTIVE >inline
operator Atom &()bio::physical::Class< Atom >inlinevirtual
operator const Atom &() constbio::physical::Class< Atom >inlinevirtual
operator const Filterable &() constbio::physical::Class< Filterable >inlinevirtual
operator const Periodic &() constbio::physical::Class< Periodic >inlinevirtual
operator const T &() constbio::physical::Class< T >inlinevirtual
operator const Writer &() constbio::physical::Class< Writer >inlinevirtual
operator Filterable &()bio::physical::Class< Filterable >inlinevirtual
operator Id() constbio::physical::Identifiable< Id >inlinevirtual
operator Periodic &()bio::physical::Class< Periodic >inlinevirtual
Class< Vasculature >::bio::Class< Vasculature >::operator Pointer< ::bio::physical::Wave >()bio::chemical::Class< T >inline
Class< Vasculature >::bio::chemical::Substance::operator Pointer< ::bio::physical::Wave >()bio::chemical::Class< Substance >inline
Class< Vasculature >::bio::molecular::Molecule::bio::Class< Vasculature >::operator Pointer< ::bio::physical::Wave >()bio::chemical::Class< T >inline
Class< Vasculature >::bio::genetic::Expressor::Class< Expressor >::bio::Class< Expressor >::Class< Expressor >::Class< Vasculature >::operator Pointer< ::bio::physical::Wave >()bio::chemical::Class< T >inline
Class< Vasculature >::bio::genetic::Expressor::UnorderedMotif< TranscriptionFactor >::Class< Vasculature >::operator Pointer< ::bio::physical::Wave >()bio::chemical::Class< T >inline
Class< Vasculature >::bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::Class< Solution >::operator Pointer< ::bio::physical::Wave >()bio::chemical::Class< Solution >inline
Class< Vasculature >::bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::DependentMotif< Solute, Solution >::bio::chemical::LinearMotif::Class< LinearMotif< CONTENT_TYPE > >::operator Pointer< ::bio::physical::Wave >()bio::chemical::Class< LinearMotif< CONTENT_TYPE > >inline
Class< Vasculature >::bio::molecular::Vesicle::Class< Vesicle >::bio::Class< Vasculature >::operator Pointer< ::bio::physical::Wave >()bio::chemical::Class< T >inline
DependentMotif< BloodVessel, Vasculature >::bio::operator Pointer< ::bio::physical::Wave >()bio::chemical::Class< T >inline
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::Class< LinearMotif< CONTENT_TYPE > >::operator Pointer< ::bio::physical::Wave >()bio::chemical::Class< LinearMotif< CONTENT_TYPE > >inline
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::UnorderedMotif< Pointer< CONTENT_TYPE > >::operator Pointer< ::bio::physical::Wave >()bio::chemical::Class< T >inline
bio::cellular::Tissue::bio::operator Pointer< ::bio::physical::Wave >()bio::chemical::Class< T >inline
Class< Vasculature >::bio::operator Pointer< Wave >()bio::physical::Class< T >inlinevirtual
Class< Vasculature >::bio::log::Writer::Class< Writer >::operator Pointer< Wave >()bio::physical::Class< Writer >inlinevirtual
Class< Vasculature >::bio::log::Writer::bio::physical::Filterable::operator Pointer< Wave >()bio::physical::Class< Filterable >inlinevirtual
Class< Vasculature >::bio::chemical::Atom::operator Pointer< Wave >()bio::physical::Class< Atom >inlinevirtual
bio::physical::Periodic::operator Pointer< Wave >()bio::physical::Class< Periodic >inlinevirtual
operator T() constbio::chemical::Atom
operator T&()bio::physical::Class< T >inlinevirtual
operator Writer &()bio::physical::Class< Writer >inlinevirtual
operator()(const Id &surfaceId)bio::molecular::Moleculevirtual
operator()(const Id &surfaceId) constbio::molecular::Moleculevirtual
operator()(const Id &surfaceId)bio::molecular::Moleculeinline
operator()(const Name &name)bio::molecular::Moleculevirtual
operator()(const Name &name) constbio::molecular::Moleculevirtual
operator()(const Name &surfaceName)bio::molecular::Moleculeinline
operator*(Pointer< Wave > signal)bio::physical::Wavevirtual
operator*()bio::physical::Wavevirtual
operator*() constbio::physical::Wavevirtual
operator+(Pointer< const Wave > other)bio::physical::Wavevirtual
operator-(Pointer< const Wave > other)bio::physical::Wavevirtual
Class< Vasculature >::bio::operator<<(std::ostream &out, const Identifiable< Id > &t)bio::physical::Identifiable< Id >inlineprotected
bio::molecular::Molecule::operator<<(Pointer< Surface > source)bio::molecular::Moleculevirtual
bio::molecular::Molecule::operator<<(Pointer< Molecule > source)bio::molecular::Moleculevirtual
Class< Vasculature >::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::operator=(const Wave &other)bio::physical::Wave
Class< Vasculature >::bio::Identifiable< Id >::bio::Class< Vasculature >::operator=(const Wave &other)bio::physical::Wave
Class< Vasculature >::bio::log::Writer::Class< Writer >::Class< Vasculature >::operator=(const Wave &other)bio::physical::Wave
Class< Vasculature >::bio::chemical::Atom::Class< Atom >::Class< Vasculature >::operator=(const Wave &other)bio::physical::Wave
Class< Vasculature >::bio::chemical::Atom::bio::ThreadSafe::operator=(const ThreadSafe &toCopy)bio::ThreadSafe
Class< Vasculature >::bio::chemical::Substance::Class< Substance >::bio::Class< Vasculature >::Class< Vasculature >::operator=(const Wave &other)bio::physical::Wave
Class< Vasculature >::bio::chemical::Substance::Covalent< UnorderedMotif< Property > >::operator=(const Covalent &other)bio::Covalent< UnorderedMotif< Property > >inline
Class< Vasculature >::bio::chemical::Substance::Covalent< UnorderedMotif< State > >::operator=(const Covalent &other)bio::Covalent< UnorderedMotif< State > >inline
Class< Vasculature >::bio::ThreadSafe::operator=(const ThreadSafe &toCopy)bio::ThreadSafe
Class< Vasculature >::bio::molecular::Molecule::Class< Vasculature >::Class< Vasculature >::operator=(const Wave &other)bio::physical::Wave
Class< Vasculature >::bio::molecular::Molecule::Metallic< chemical::DependentMotif< Surface, Molecule > >::operator=(const Metallic &other)bio::Metallic< chemical::DependentMotif< Surface, Molecule > >inline
Class< Vasculature >::bio::genetic::Expressor::Class< Vasculature >::Class< Vasculature >::operator=(const Wave &other)bio::physical::Wave
Class< Vasculature >::bio::genetic::Expressor::UnorderedMotif< TranscriptionFactor >::operator=(const UnorderedMotif< TranscriptionFactor > &toCopy)bio::chemical::UnorderedMotif< TranscriptionFactor >inline
Class< Vasculature >::bio::chemical::Class::Class< Vasculature >::Class< Vasculature >::operator=(const Wave &other)bio::physical::Wave
Class< Vasculature >::bio::chemical::AbstractMotif::operator=(const AbstractMotif &other)bio::chemical::AbstractMotif
Class< Vasculature >::bio::genetic::Expressor::Covalent< chemical::LinearMotif< Plasmid > >::operator=(const Covalent &other)bio::Covalent< chemical::LinearMotif< Plasmid > >inline
Class< Vasculature >::bio::genetic::Expressor::Covalent< chemical::LinearMotif< molecular::Protein > >::operator=(const Covalent &other)bio::Covalent< chemical::LinearMotif< molecular::Protein > >inline
Class< Vasculature >::bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::DependentMotif< Solute, Solution >::bio::chemical::LinearMotif::UnorderedMotif< Pointer< CONTENT_TYPE > >::Class< Vasculature >::operator=(const UnorderedMotif< Pointer< CONTENT_TYPE > > &toCopy)bio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inline
Class< Vasculature >::bio::physical::Periodic::Class< Vasculature >::Class< Vasculature >::operator=(const Wave &other)bio::physical::Wave
Class< Vasculature >::bio::molecular::Vesicle::Class< Vasculature >::Class< Vasculature >::operator=(const Wave &other)bio::physical::Wave
DependentMotif< BloodVessel, Vasculature >::operator=(const Wave &other)bio::physical::Wave
DependentMotif< BloodVessel, Vasculature >::operator=(const Wave &other)bio::physical::Wave
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::UnorderedMotif< Pointer< CONTENT_TYPE > >::operator=(const UnorderedMotif< Pointer< CONTENT_TYPE > > &toCopy)bio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inline
DependentMotif< BloodVessel, Vasculature >::bio::chemical::Class::operator=(const Wave &other)bio::physical::Wave
DependentMotif< BloodVessel, Vasculature >::bio::chemical::AbstractMotif::operator=(const AbstractMotif &other)bio::chemical::AbstractMotif
bio::cellular::Tissue::operator=(const Wave &other)bio::physical::Wave
bio::cellular::Tissue::Metallic< chemical::DependentMotif< Cell, Tissue > >::operator=(const Metallic &other)bio::Metallic< chemical::DependentMotif< Cell, Tissue > >inline
bio::cellular::Tissue::Metallic< chemical::DependentMotif< Tissue, Tissue > >::operator=(const Metallic &other)bio::Metallic< chemical::DependentMotif< Tissue, Tissue > >inline
operator==(const Identifier id) constbio::physical::Identifiable< Id >inlinevirtual
operator==(const Name &name) constbio::physical::Identifiable< Id >inlinevirtual
operator==(const Identifiable< Id > &other) constbio::physical::Identifiable< Id >inlinevirtual
operator>>(Pointer< Surface > target)bio::molecular::Moleculevirtual
operator>>(Pointer< Molecule > target)bio::molecular::Moleculevirtual
operator|(Pointer< Symmetry > symmetry)bio::physical::Wavevirtual
Periodic(Milliseconds interval=GetDefaultInterval())bio::physical::Periodic
Perspective typedefbio::physical::Observer< PERSPECTIVE >
Class< Vasculature >::bio::RegisterProperties(const Properties &properties)bio::chemical::Class< T >inlinevirtual
Class< Vasculature >::bio::chemical::Substance::RegisterProperties(const Properties &properties)bio::chemical::Class< Substance >inlinevirtual
Class< Vasculature >::bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::Class< Solution >::RegisterProperties(const Properties &properties)bio::chemical::Class< Solution >inlinevirtual
bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::DependentMotif< Solute, Solution >::bio::chemical::LinearMotif::Class< LinearMotif< CONTENT_TYPE > >::RegisterProperties(const Properties &properties)bio::chemical::Class< LinearMotif< CONTENT_TYPE > >inlinevirtual
bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::RegisterType()bio::chemical::Elementary< T >inlineprotected
bio::chemical::Substance::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::RegisterType()bio::chemical::Elementary< T >inline
bio::molecular::Molecule::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::RegisterType()bio::chemical::Elementary< T >inline
bio::genetic::Expressor::bio::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::RegisterType()bio::chemical::Elementary< T >inline
bio::genetic::Expressor::UnorderedMotif< TranscriptionFactor >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::RegisterType()bio::chemical::Elementary< T >inline
bio::molecular::Vesicle::bio::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::RegisterType()bio::chemical::Elementary< T >inline
DependentMotif< BloodVessel, Vasculature >::bio::RegisterType()bio::chemical::Elementary< T >inline
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::Class< LinearMotif< CONTENT_TYPE > >::RegisterType()bio::chemical::Elementary< T >inline
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::UnorderedMotif< Pointer< CONTENT_TYPE > >::RegisterType()bio::chemical::Elementary< T >inline
bio::cellular::Tissue::bio::RegisterType()bio::chemical::Elementary< T >inline
Class< Vasculature >::bio::Reify(Pointer< const Symmetry > symmetry)bio::physical::Wavevirtual
Class< Vasculature >::bio::log::Writer::bio::physical::Filterable::Reify(Pointer< const Symmetry > symmetry)bio::physical::Filterablevirtual
Class< Vasculature >::bio::chemical::Atom::Reify(Pointer< const physical::Symmetry > symmetry)bio::chemical::Atomvirtual
Class< Vasculature >::bio::molecular::Molecule::Reify(Pointer< const physical::Symmetry > symmetry)bio::molecular::Moleculevirtual
Class< Vasculature >::bio::genetic::Expressor::Reify(Pointer< const physical::Symmetry > symmetry)bio::genetic::Expressorvirtual
bio::physical::Periodic::Reify(Pointer< const Symmetry > symmetry)bio::physical::Periodicvirtual
Class< Vasculature >::ReleaseContentOwnership()bio::chemical::LinearMotif< CONTENT_TYPE >inlineprotected
DependentMotif< BloodVessel, Vasculature >::ReleaseContentOwnership()bio::chemical::LinearMotif< CONTENT_TYPE >inline
Class< Vasculature >::ReleaseImplementation(const ContentPointer content)bio::chemical::LinearMotif< CONTENT_TYPE >inlineprotected
DependentMotif< BloodVessel, Vasculature >::ReleaseImplementation(const ContentPointer content)bio::chemical::LinearMotif< CONTENT_TYPE >inline
Class< Vasculature >::Remove(const T t)bio::chemical::UnorderedStructureInterfaceinline
Class< Vasculature >::Remove(Pointer< T > t)bio::chemical::UnorderedStructureInterfaceinline
bio::cellular::Tissue::Remove(const T t)bio::cellular::Tissueinline
RemoveById(const Id &id)bio::chemical::LinearStructureInterfaceinline
RemoveByIdImplementation(const Id &id)bio::chemical::LinearMotif< CONTENT_TYPE >inlineprotectedvirtual
RemoveByName(const Name &name)bio::chemical::LinearStructureInterfaceinline
RemoveByNameImplementation(const Name &name)bio::chemical::LinearMotif< CONTENT_TYPE >inlineprotectedvirtual
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::RemoveImplementation(const TranscriptionFactor content)bio::chemical::UnorderedMotif< TranscriptionFactor >inlinevirtual
bio::molecular::Vesicle::RemoveImplementation(const ContentPointer content)bio::chemical::LinearMotif< CONTENT_TYPE >inlinevirtual
UnorderedMotif< Pointer< CONTENT_TYPE > >::RemoveImplementation(const Pointer< CONTENT_TYPE > content)bio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inlinevirtual
ResolveBondedForReadById(AtomicNumber bondId) constbio::chemical::Atom
ResolveBondedForWriteById(AtomicNumber bondId)bio::chemical::Atom
ResolveLinearMotif()bio::chemical::LinearStructureInterfaceinlineprotected
ResolveLinearMotif() constbio::chemical::LinearStructureInterfaceinlineprotected
RotateTo(const Id &surfaceId)bio::molecular::Moleculevirtual
RotateTo(const Id &surfaceId) constbio::molecular::Moleculevirtual
RotateTo(const Name &surfaceName)bio::molecular::Moleculevirtual
RotateTo(const Name &surfaceName) constbio::molecular::Moleculevirtual
RotateToOrDefine(const Id &surfaceId)bio::molecular::Moleculevirtual
RotateToOrDefine(const Name &surfaceName)bio::molecular::Molecule
RotateToOrDefine(const Id &surfaceId, T &assignment)bio::molecular::Moleculeinline
RotateToOrDefine(const Name &surfaceName, T &assignment)bio::molecular::Moleculeinline
Separate(const Id &id)bio::chemical::Solutionprotectedvirtual
Class< Vasculature >::bio::SetEnvironment(Pointer< ENVIRONMENT > environment)bio::molecular::Class< T >inline
Class< Vasculature >::bio::molecular::Molecule::SetEnvironment(Pointer< ENVIRONMENT > environment)bio::molecular::Class< Molecule >inline
Class< Vasculature >::bio::genetic::Expressor::Class< Expressor >::bio::SetEnvironment(Pointer< ENVIRONMENT > environment)bio::molecular::Class< T >inline
Class< Vasculature >::bio::genetic::Expressor::bio::molecular::Vesicle::Class< Vesicle >::SetEnvironment(Pointer< ENVIRONMENT > environment)bio::molecular::Class< Vesicle >inline
Class< Vasculature >::bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::SetEnvironment(EnvironmentPointer environment)bio::chemical::DependentMotif< Solute, Solution >inlinevirtual
Class< Vasculature >::bio::chemical::EnvironmentDependent::SetEnvironment(EnvironmentPointer environment)bio::chemical::EnvironmentDependent< T >inlinevirtual
Class< Vasculature >::bio::molecular::Vesicle::Class< Vesicle >::SetEnvironment(Pointer< ENVIRONMENT > environment)bio::molecular::Class< Vesicle >inline
DependentMotif< BloodVessel, Vasculature >::SetEnvironment(EnvironmentPointer environment)bio::chemical::DependentMotif< BloodVessel, Vasculature >inlinevirtual
bio::cellular::Tissue::SetEnvironment(Pointer< Tissue > environment)bio::cellular::Tissuevirtual
bio::Class< Tissue >::SetEnvironment(Pointer< ENVIRONMENT > environment)bio::molecular::Class< T >inline
bio::EnvironmentDependent< Tissue >::SetEnvironment(EnvironmentPointer environment)bio::chemical::EnvironmentDependent< Tissue >inlinevirtual
EnvironmentDependent< Organ >::SetEnvironment(EnvironmentPointer environment)bio::chemical::EnvironmentDependent< Organ >inlinevirtual
SetFilter(Filter filter)bio::physical::Filterablevirtual
SetId(Identifier id)bio::physical::Identifiable< Id >inlinevirtual
Class< Vasculature >::SetInterval(Milliseconds period)bio::cellular::Class< T >inlinevirtual
bio::cellular::Tissue::SetInterval(Milliseconds period)bio::cellular::Class< Tissue >inlinevirtual
SetLastCrestTimestamp(Timestamp lastCrest)bio::physical::Periodicvirtual
SetName(const Name &name)bio::physical::Identifiable< Id >inlinevirtual
SetPerspective(Pointer< Perspective< Id > > perspective)bio::physical::Identifiable< Id >inlinevirtual
bio::physical::Observer::SetPerspective(Pointer< Perspective > perspective)bio::physical::Observer< PERSPECTIVE >inlinevirtual
bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::SetTypeId(uint16_t typeId)bio::physical::Waveinline
Identifiable< Id >::bio::bio::bio::bio::bio::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::SetTypeId(uint16_t typeId)bio::physical::Waveinline
bio::log::Writer::Class< Writer >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::SetTypeId(uint16_t typeId)bio::physical::Waveinline
bio::chemical::Atom::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::SetTypeId(uint16_t typeId)bio::physical::Waveinline
bio::chemical::Substance::bio::Class< Substance >::Class< Substance >::Class< Substance >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::SetTypeId(uint16_t typeId)bio::physical::Waveinline
bio::molecular::Molecule::bio::Class< Molecule >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::SetTypeId(uint16_t typeId)bio::physical::Waveinline
bio::genetic::Expressor::bio::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Expressor >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::SetTypeId(uint16_t typeId)bio::physical::Waveinline
bio::genetic::Expressor::UnorderedMotif< TranscriptionFactor >::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::SetTypeId(uint16_t typeId)bio::physical::Waveinline
bio::physical::Periodic::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::SetTypeId(uint16_t typeId)bio::physical::Waveinline
bio::molecular::Vesicle::bio::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vesicle >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::SetTypeId(uint16_t typeId)bio::physical::Waveinline
DependentMotif< BloodVessel, Vasculature >::bio::SetTypeId(uint16_t typeId)bio::physical::Waveinline
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::bio::Class< LinearMotif< CONTENT_TYPE > >::Class< LinearMotif< CONTENT_TYPE > >::Class< LinearMotif< CONTENT_TYPE > >::Class< LinearMotif< CONTENT_TYPE > >::SetTypeId(uint16_t typeId)bio::physical::Waveinline
DependentMotif< BloodVessel, Vasculature >::bio::chemical::LinearMotif::UnorderedMotif< Pointer< CONTENT_TYPE > >::bio::SetTypeId(uint16_t typeId)bio::physical::Waveinline
bio::cellular::Tissue::bio::Class< Tissue >::Class< Tissue >::SetTypeId(uint16_t typeId)bio::physical::Waveinline
ShouldLog(Pointer< const Writer > writer, LogLevel level)bio::log::Writerstatic
Class< Vasculature >::bio::Spin() constbio::physical::Wavevirtual
Class< Vasculature >::bio::log::Writer::bio::physical::Filterable::Spin() constbio::physical::Filterablevirtual
Class< Vasculature >::bio::chemical::Atom::Spin() constbio::chemical::Atomvirtual
Class< Vasculature >::bio::molecular::Molecule::Spin() constbio::molecular::Moleculevirtual
Class< Vasculature >::bio::genetic::Expressor::Spin() constbio::genetic::Expressorvirtual
bio::physical::Periodic::Spin() constbio::physical::Periodicvirtual
statesbio::chemical::Substance
Structure()bio::chemical::Structure
Class< Vasculature >::bio::Superpose(const ::bio::physical::ConstWaves &displacement, Pointer< ::bio::physical::Interference > pattern)bio::chemical::Class< T >inlinevirtual
Class< Vasculature >::bio::Superpose(Pointer< const ::bio::physical::Wave > displacement, Pointer< ::bio::physical::Interference > pattern)bio::chemical::Class< T >inlinevirtual
Class< Vasculature >::bio::physical::Class::Superpose(Pointer< const Wave > displacement, Pointer< Interference > pattern)bio::physical::Wavevirtual
Class< Vasculature >::bio::physical::Class::Superpose(const ConstWaves &displacement, Pointer< Interference > pattern)bio::physical::Wavevirtual
Class< Vasculature >::bio::chemical::Substance::Superpose(const ::bio::physical::ConstWaves &displacement, Pointer< ::bio::physical::Interference > pattern)bio::chemical::Class< Substance >inlinevirtual
Class< Vasculature >::bio::chemical::Substance::Superpose(Pointer< const ::bio::physical::Wave > displacement, Pointer< ::bio::physical::Interference > pattern)bio::chemical::Class< Substance >inlinevirtual
Class< Vasculature >::bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::Class< Solution >::Superpose(const ::bio::physical::ConstWaves &displacement, Pointer< ::bio::physical::Interference > pattern)bio::chemical::Class< Solution >inlinevirtual
Class< Vasculature >::bio::chemical::Solution::Superpose(Pointer< const ::bio::physical::Wave > displacement, Pointer< ::bio::physical::Interference > pattern)bio::chemical::Class< Solution >inlinevirtual
bio::genetic::Expressor::bio::molecular::Vesicle::bio::chemical::Solution::DependentMotif< Solute, Solution >::bio::chemical::LinearMotif::Class< LinearMotif< CONTENT_TYPE > >::Superpose(const ::bio::physical::ConstWaves &displacement, Pointer< ::bio::physical::Interference > pattern)bio::chemical::Class< LinearMotif< CONTENT_TYPE > >inlinevirtual
bio::chemical::LinearMotif::Superpose(Pointer< const ::bio::physical::Wave > displacement, Pointer< ::bio::physical::Interference > pattern)bio::chemical::Class< LinearMotif< CONTENT_TYPE > >inlinevirtual
Synchronize()bio::circulatory::Vasculaturevirtual
bio::ThreadSafe()bio::ThreadSafe
bio::ThreadSafe(const ThreadSafe &toCopy)bio::ThreadSafe
bio::ThreadSafe::ThreadSafe()bio::ThreadSafe
bio::ThreadSafe::ThreadSafe(const ThreadSafe &toCopy)bio::ThreadSafe
TransferFrom(Pointer< Molecule > source, const Name &surface)bio::molecular::Moleculevirtual
Translate(Pointer< const RNA > mRNA)bio::genetic::Expressorvirtual
UnindexBond(AtomicNumber bondedId)bio::chemical::Atomprotected
bio::UnlockMutexShared() constbio::ThreadSafe
bio::ThreadSafe::UnlockMutexShared() constbio::ThreadSafe
bio::UnlockThread() constbio::ThreadSafe
bio::ThreadSafe::UnlockThread() constbio::ThreadSafe
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::UnorderedMotif()bio::chemical::UnorderedMotif< TranscriptionFactor >inline
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::UnorderedMotif(ContentsAllocation allocation)bio::chemical::UnorderedMotif< TranscriptionFactor >inlineexplicitprotected
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::UnorderedMotif(Pointer< const Contents > contents)bio::chemical::UnorderedMotif< TranscriptionFactor >inline
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::UnorderedMotif(Pointer< const UnorderedMotif< TranscriptionFactor > > toCopy)bio::chemical::UnorderedMotif< TranscriptionFactor >inline
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::UnorderedMotif(const UnorderedMotif< TranscriptionFactor > &toCopy)bio::chemical::UnorderedMotif< TranscriptionFactor >inline
bio::molecular::Vesicle::Class< Vasculature >::UnorderedMotif()bio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inline
bio::molecular::Vesicle::Class< Vasculature >::UnorderedMotif(ContentsAllocation allocation)bio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inlineexplicitprotected
bio::molecular::Vesicle::Class< Vasculature >::UnorderedMotif(Pointer< const Contents > contents)bio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inline
bio::molecular::Vesicle::Class< Vasculature >::UnorderedMotif(Pointer< const UnorderedMotif< Pointer< CONTENT_TYPE > > > toCopy)bio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inline
bio::molecular::Vesicle::Class< Vasculature >::UnorderedMotif(const UnorderedMotif< Pointer< CONTENT_TYPE > > &toCopy)bio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inline
DependentMotif< BloodVessel, Vasculature >::UnorderedMotif()bio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inline
DependentMotif< BloodVessel, Vasculature >::UnorderedMotif(ContentsAllocation allocation)bio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inlineexplicitprotected
DependentMotif< BloodVessel, Vasculature >::UnorderedMotif(Pointer< const Contents > contents)bio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inline
DependentMotif< BloodVessel, Vasculature >::UnorderedMotif(Pointer< const UnorderedMotif< Pointer< CONTENT_TYPE > > > toCopy)bio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inline
DependentMotif< BloodVessel, Vasculature >::UnorderedMotif(const UnorderedMotif< Pointer< CONTENT_TYPE > > &toCopy)bio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inline
UnorderedStructureInterface()bio::chemical::UnorderedStructureInterfaceinline
Use(const Name &varName, Pointer< T > varPtr)bio::molecular::Moleculeinline
Use(const Id &id, Pointer< T > varPtr)bio::molecular::Moleculeinline
bio::VirtualBase()bio::VirtualBaseprotected
bio::physical::Periodic::VirtualBase()bio::VirtualBaseprotected
bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Wave(Pointer< Symmetry > symmetry=NULL)bio::physical::Wave
bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Wave(const Wave &other)bio::physical::Wave
Identifiable< Id >::bio::bio::bio::bio::bio::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Wave(Pointer< Symmetry > symmetry=NULL)bio::physical::Wave
Identifiable< Id >::bio::bio::bio::bio::bio::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Wave(const Wave &other)bio::physical::Wave
bio::log::Writer::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Wave(Pointer< Symmetry > symmetry=NULL)bio::physical::Wave
bio::log::Writer::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Wave(const Wave &other)bio::physical::Wave
bio::chemical::Atom::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Wave(Pointer< Symmetry > symmetry=NULL)bio::physical::Wave
bio::chemical::Atom::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Wave(const Wave &other)bio::physical::Wave
bio::chemical::Substance::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Wave(Pointer< Symmetry > symmetry=NULL)bio::physical::Wave
bio::chemical::Substance::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Wave(const Wave &other)bio::physical::Wave
bio::molecular::Molecule::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Wave(Pointer< Symmetry > symmetry=NULL)bio::physical::Wave
bio::molecular::Molecule::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Wave(const Wave &other)bio::physical::Wave
bio::genetic::Expressor::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Wave(Pointer< Symmetry > symmetry=NULL)bio::physical::Wave
bio::genetic::Expressor::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Wave(const Wave &other)bio::physical::Wave
UnorderedMotif< TranscriptionFactor >::bio::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Wave(Pointer< Symmetry > symmetry=NULL)bio::physical::Wave
UnorderedMotif< TranscriptionFactor >::bio::bio::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Wave(const Wave &other)bio::physical::Wave
bio::physical::Periodic::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Wave(Pointer< Symmetry > symmetry=NULL)bio::physical::Wave
bio::physical::Periodic::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Wave(const Wave &other)bio::physical::Wave
bio::molecular::Vesicle::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Wave(Pointer< Symmetry > symmetry=NULL)bio::physical::Wave
bio::molecular::Vesicle::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Class< Vasculature >::Wave(const Wave &other)bio::physical::Wave
DependentMotif< BloodVessel, Vasculature >::Wave(Pointer< Symmetry > symmetry=NULL)bio::physical::Wave
DependentMotif< BloodVessel, Vasculature >::Wave(const Wave &other)bio::physical::Wave
bio::chemical::LinearMotif::DependentMotif< BloodVessel, Vasculature >::DependentMotif< BloodVessel, Vasculature >::Wave(Pointer< Symmetry > symmetry=NULL)bio::physical::Wave
bio::chemical::LinearMotif::DependentMotif< BloodVessel, Vasculature >::DependentMotif< BloodVessel, Vasculature >::Wave(const Wave &other)bio::physical::Wave
UnorderedMotif< Pointer< CONTENT_TYPE > >::DependentMotif< BloodVessel, Vasculature >::Wave(Pointer< Symmetry > symmetry=NULL)bio::physical::Wave
UnorderedMotif< Pointer< CONTENT_TYPE > >::DependentMotif< BloodVessel, Vasculature >::Wave(const Wave &other)bio::physical::Wave
bio::cellular::Tissue::Wave(Pointer< Symmetry > symmetry=NULL)bio::physical::Wave
bio::cellular::Tissue::Wave(const Wave &other)bio::physical::Wave
Writer()bio::log::Writer
Writer(Filter logFilter)bio::log::Writer
~AbstractMotif()bio::chemical::AbstractMotifvirtual
~Atom()bio::chemical::Atomvirtual
Class< Vasculature >::~Class()bio::circulatory::Class< Vasculature >inlinevirtual
bio::cellular::Tissue::~Class()bio::cellular::Class< Tissue >inlinevirtual
Class< Vasculature >::bio::Covalent< UnorderedMotif< Property > >::~Covalent()bio::Covalent< UnorderedMotif< Property > >inlinevirtual
Class< Vasculature >::bio::Covalent< UnorderedMotif< State > >::~Covalent()bio::Covalent< UnorderedMotif< State > >inlinevirtual
Class< Vasculature >::bio::genetic::Expressor::Covalent< chemical::LinearMotif< Plasmid > >::~Covalent()bio::Covalent< chemical::LinearMotif< Plasmid > >inlinevirtual
bio::genetic::Expressor::Covalent< chemical::LinearMotif< molecular::Protein > >::~Covalent()bio::Covalent< chemical::LinearMotif< molecular::Protein > >inlinevirtual
Class< Vasculature >::~DependentMotif()bio::chemical::DependentMotif< Solute, Solution >inlineprotectedvirtual
DependentMotif< BloodVessel, Vasculature >::~DependentMotif()bio::chemical::DependentMotif< BloodVessel, Vasculature >inlinevirtual
~Elementary()bio::chemical::Elementary< T >inlineprotectedvirtual
Class< Vasculature >::~EnvironmentDependent()bio::chemical::EnvironmentDependent< T >inlineprotectedvirtual
bio::cellular::Tissue::EnvironmentDependent< Tissue >::~EnvironmentDependent()bio::chemical::EnvironmentDependent< Tissue >inlinevirtual
bio::cellular::Tissue::EnvironmentDependent< Organ >::~EnvironmentDependent()bio::chemical::EnvironmentDependent< Organ >inlinevirtual
~Filterable()bio::physical::Filterablevirtual
~Identifiable()bio::physical::Identifiable< Id >inlinevirtual
~LinearMotif()bio::chemical::LinearMotif< CONTENT_TYPE >inlineprotectedvirtual
~LinearStructureInterface()bio::chemical::LinearStructureInterfaceinlinevirtual
Class< Vasculature >::~Metallic()bio::Metallic< chemical::DependentMotif< Surface, Molecule > >inlinevirtual
bio::cellular::Tissue::Metallic< chemical::DependentMotif< Cell, Tissue > >::~Metallic()bio::Metallic< chemical::DependentMotif< Cell, Tissue > >inlinevirtual
bio::cellular::Tissue::Metallic< chemical::DependentMotif< Tissue, Tissue > >::~Metallic()bio::Metallic< chemical::DependentMotif< Tissue, Tissue > >inlinevirtual
~Molecule()bio::molecular::Moleculevirtual
~Observer()bio::physical::Observer< PERSPECTIVE >inlinevirtual
~Periodic()bio::physical::Periodicvirtual
~Structure()bio::chemical::Structurevirtual
~Substance()bio::chemical::Substancevirtual
bio::~ThreadSafe()bio::ThreadSafe
bio::ThreadSafe::~ThreadSafe()bio::ThreadSafe
Class< Vasculature >::bio::UnorderedMotif< TranscriptionFactor >::~UnorderedMotif()bio::chemical::UnorderedMotif< TranscriptionFactor >inlinevirtual
bio::molecular::Vesicle::~UnorderedMotif()bio::chemical::UnorderedMotif< Pointer< CONTENT_TYPE > >inlinevirtual
~UnorderedStructureInterface()bio::chemical::UnorderedStructureInterfaceinlinevirtual
~Vesicle()bio::molecular::Vesiclevirtual
~VirtualBase()bio::VirtualBaseprotectedvirtual
~Wave()bio::physical::Wavevirtual
~Writer()bio::log::Writervirtual
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