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Public Member Functions | Protected Attributes | List of all members
bio::neural::Impulse Class Reference

#include <Impulse.h>

Inheritance diagram for bio::neural::Impulse:
Inheritance graph
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Collaboration diagram for bio::neural::Impulse:
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Public Member Functions

 Impulse (FiringCondition trigger=firing_condition::None(), Name impulseName="", Pointer< Neuron > caller=NULL, bool shouldBeActive=true)
 
virtual ~Impulse ()
 
FiringCondition GetTrigger () const
 
Pointer< molecular::ProteinGetImpulseProtein ()
 
void SetCaller (Pointer< Neuron > caller)
 
bool Send ()
 
- Public Member Functions inherited from bio::chemical::Class< Impulse >
virtual Pointer< ::bio::physical::WaveClone () const
 
Pointer< ::bio::physical::WaveAsWave ()
 
Pointer< const ::bio::physical::WaveAsWave () const
 
 operator Pointer< ::bio::physical::Wave > ()
 
virtual Pointer< ::bio::physical::WaveModulate (Pointer< ::bio::physical::Wave > signal)
 
virtual Pointer< ::bio::physical::WaveDemodulate ()
 
virtual Pointer< const ::bio::physical::WaveDemodulate () const
 
virtual Pointer< ::bio::physical::WaveSuperpose (const ::bio::physical::ConstWaves &displacement, Pointer< ::bio::physical::Interference > pattern)
 
virtual bool Superpose (Pointer< const ::bio::physical::Wave > displacement, Pointer< ::bio::physical::Interference > pattern)
 
 Class (Pointer< Impulse > object, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())
 
 Class (Pointer< Impulse > object, const Name &name, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())
 
 Class (Pointer< Impulse > object, const Id &id, Filter filter=filter::Default(), SymmetryType symmetryType=symmetry_type::Object())
 
 Class (const Class &other)
 
virtual ~Class ()
 
virtual bool RegisterProperties (const Properties &properties)
 
virtual Properties GetProperties () const
 
virtual Pointer< AtomAsAtom ()
 
virtual Pointer< const AtomAsAtom () const
 
virtual Code Attenuate (Pointer< const physical::Wave > other)
 
virtual Code Disattenuate (Pointer< const physical::Wave > other)
 
- Public Member Functions inherited from bio::physical::Class< T >
 Class (Pointer< T > object, Pointer< Symmetry > symmetry=NULL)
 
 Class (Pointer< T > object, SymmetryFactory symmetryFactory)
 
 Class (const Class &other)
 
virtual Pointer< TGetWaveObject ()
 
virtual Pointer< const TGetWaveObject () const
 
virtual operator T& ()
 
virtual operator const T & () const
 
Pointer< WaveAsWave ()
 
Pointer< const WaveAsWave () const
 
virtual operator Pointer< Wave > ()
 
- Public Member Functions inherited from bio::physical::Wave
 Wave (Pointer< Symmetry > symmetry=NULL)
 
 Wave (const Wave &other)
 
Waveoperator= (const Wave &other)
 
virtual ~Wave ()
 
Pointer< const SymmetryGetSymmetry () const
 
virtual bool Superpose (Pointer< const Wave > displacement, Pointer< Interference > pattern)
 
virtual Pointer< WaveSuperpose (const ConstWaves &displacement, Pointer< Interference > pattern)
 
virtual Pointer< WaveModulate (Pointer< Wave > signal)
 
Pointer< WaveAsWave ()
 
Pointer< const WaveAsWave () const
 
virtual void operator| (Pointer< Symmetry > symmetry)
 
virtual Pointer< Waveoperator* (Pointer< Wave > signal)
 
virtual Pointer< Waveoperator* ()
 
virtual Pointer< const Waveoperator* () const
 
virtual void operator+ (Pointer< const Wave > other)
 
virtual void operator- (Pointer< const Wave > other)
 
uint16_t GetTypeId () const
 
void SetTypeId (uint16_t typeId)
 
- Public Member Functions inherited from bio::physical::Identifiable< Id >
 Identifiable (Pointer< Perspective< Id > > perspective=NULL)
 
 Identifiable (const Name &name, Pointer< Perspective< Id > > perspective=NULL)
 
 Identifiable (Identifier id, Pointer< Perspective< Id > > perspective=NULL)
 
 Identifiable (const Identifiable &other)
 
virtual ~Identifiable ()
 
virtual operator Id () const
 
virtual bool operator== (const Identifier id) const
 
virtual bool operator== (const Name &name) const
 
virtual bool operator== (const Identifiable< Id > &other) const
 
virtual Name GetName () const
 
virtual Identifier GetId () const
 
virtual bool SetName (const Name &name)
 
virtual bool SetId (Identifier id)
 
virtual bool IsName (const Name &name) const
 
virtual bool IsNameInsensitive (const Name &name) const
 
virtual bool IsId (Identifier id) const
 
virtual void SetPerspective (Pointer< Perspective< Id > > perspective)
 
- Public Member Functions inherited from bio::physical::Observer< PERSPECTIVE >
 Observer (Pointer< Perspective > perspective=NULL)
 
 Observer (const Observer &other)
 
virtual ~Observer ()
 
virtual void SetPerspective (Pointer< Perspective > perspective)
 
virtual Pointer< PerspectiveGetPerspective () const
 
- Public Member Functions inherited from bio::log::Writer
 Writer ()
 
 Writer (Filter logFilter)
 
virtual ~Writer ()
 
virtual Pointer< const WriterAsLogWriter () const
 
bool IsEnabled (LogLevel level) const
 
virtual void Log (LogLevel level, const char *format, va_list args) const
 
- Public Member Functions inherited from bio::physical::Class< Writer >
 Class (Pointer< Writer > object, Pointer< Symmetry > symmetry=NULL)
 
 Class (Pointer< Writer > object, SymmetryFactory symmetryFactory)
 
 Class (const Class &other)
 
virtual Pointer< Writer > GetWaveObject ()
 
virtual Pointer< const Writer > GetWaveObject () const
 
virtual operator Writer & ()
 
virtual operator const Writer & () const
 
Pointer< WaveAsWave ()
 
Pointer< const WaveAsWave () const
 
virtual operator Pointer< Wave > ()
 
- Public Member Functions inherited from bio::physical::Filterable
 Filterable ()
 
 Filterable (Filter filter)
 
virtual ~Filterable ()
 
virtual void InitializeImplementation (ByteStreams &args)
 
virtual void SetFilter (Filter filter)
 
Filter GetFilter () const
 
virtual Pointer< const SymmetrySpin () const
 
virtual Code Reify (Pointer< const Symmetry > symmetry)
 
- Public Member Functions inherited from bio::physical::Class< Filterable >
 Class (Pointer< Filterable > object, Pointer< Symmetry > symmetry=NULL)
 
 Class (Pointer< Filterable > object, SymmetryFactory symmetryFactory)
 
 Class (const Class &other)
 
virtual Pointer< FilterableGetWaveObject ()
 
virtual Pointer< const FilterableGetWaveObject () const
 
virtual operator Filterable & ()
 
virtual operator const Filterable & () const
 
Pointer< WaveAsWave ()
 
Pointer< const WaveAsWave () const
 
virtual operator Pointer< Wave > ()
 
- Public Member Functions inherited from bio::chemical::Atom
 Atom ()
 
 Atom (const Atom &other)
 
virtual ~Atom ()
 
void CloneBondsFrom (const Atom &other, BondClonePolicy policy=&Atom::DefaultBondClonePolicy)
 
virtual Pointer< const physical::SymmetrySpin () const
 
virtual Code Reify (Pointer< const physical::Symmetry > symmetry)
 
Pointer< physical::WaveGetBonded (Valence position)
 
Pointer< const physical::WaveGetBonded (Valence position) const
 
Pointer< const physical::WaveResolveBondedForReadById (AtomicNumber bondId) const
 
Pointer< physical::WaveResolveBondedForWriteById (AtomicNumber bondId)
 
template<typename T >
Cow< TAsBonded () const
 
template<typename T >
Pointer< TAsBondedQuantum () const
 
template<typename T >
atom_detail::AsResultType< T, type::IsWaveImplementation< typenametype::RemovePointer< T >::Type >::sValue >::Type As () const
 
template<typename T >
 operator T () const
 
template<typename T >
Valence FormBond (T toBond, BondType type=bond_type::Unknown())
 
template<typename T >
bool BreakBond (T toDisassociate, BondType type=bond_type::Unknown())
 
Valence GetBondPosition (AtomicNumber bondedId) const
 
Valence GetBondPosition (const Name &typeName) const
 
Valence GetBondPositionLocked (AtomicNumber bondedId) const
 
template<typename T >
Valence GetBondPosition () const
 
BondType GetBondType (Valence position) const
 
template<typename T >
BondType GetBondType () const
 
Pointer< BondsGetAllBonds ()
 
Pointer< const BondsGetAllBonds () const
 
void ForEachBond (BondVisitor visitor, void *context=NULL) const
 
void ForEachBondMutable (BondMutator mutator, void *context=NULL)
 
virtual Valence FormBondImplementation (Pointer< physical::Wave > toBond, AtomicNumber id, BondType type)
 
Valence FormBondImplementation (Pointer< physical::Wave > toBond, AtomicNumber id, BondType type, bool ownsBonded)
 
Valence FormBondImplementationLocked (Pointer< physical::Wave > toBond, AtomicNumber id, BondType type, bool ownsBonded)
 
virtual bool BreakBondImplementation (AtomicNumber id, BondType type)
 
bool BreakBondImplementationLocked (AtomicNumber id, BondType type)
 
- Public Member Functions inherited from bio::physical::Class< Atom >
 Class (Pointer< Atom > object, Pointer< Symmetry > symmetry=NULL)
 
 Class (Pointer< Atom > object, SymmetryFactory symmetryFactory)
 
 Class (const Class &other)
 
virtual Pointer< Atom > GetWaveObject ()
 
virtual Pointer< const Atom > GetWaveObject () const
 
virtual operator Atom & ()
 
virtual operator const Atom & () const
 
Pointer< WaveAsWave ()
 
Pointer< const WaveAsWave () const
 
virtual operator Pointer< Wave > ()
 
- Public Member Functions inherited from bio::ThreadSafe
 ThreadSafe ()
 
 ThreadSafe (const ThreadSafe &toCopy)
 
ThreadSafeoperator= (const ThreadSafe &toCopy)
 
 ~ThreadSafe ()
 
void LockThread () const
 
void UnlockThread () const
 
void LockMutexShared () const
 
void UnlockMutexShared () const
 

Protected Attributes

FiringCondition mTrigger
 
Pointer< molecular::ProteinmImpulse
 
Pointer< NeuronmCaller
 
bool mShouldBeActive
 
- Protected Attributes inherited from bio::physical::Class< T >
Pointer< TmObject
 
- Protected Attributes inherited from bio::physical::Wave
LazyPointer< SymmetrymSymmetry
 
bool mHasSignal
 
uint16_t mTypeId
 
- Protected Attributes inherited from bio::VirtualBase
bool mHasBeenInitialized
 
- Protected Attributes inherited from bio::physical::Class< Writer >
Pointer< Writer > mObject
 
- Protected Attributes inherited from bio::physical::Filterable
Filter mFilter
 
- Protected Attributes inherited from bio::physical::Class< Filterable >
Pointer< FilterablemObject
 
- Protected Attributes inherited from bio::chemical::Atom
Bonds mBonds
 
::std::map< AtomicNumber, ValencemBondIndex
 
Arrangement< Pointer< const physical::Wave > > mBackflowPreventer
 
- Protected Attributes inherited from bio::physical::Class< Atom >
Pointer< Atom > mObject
 

Additional Inherited Members

- Public Types inherited from bio::physical::Identifiable< Id >
typedef Id Identifier
 
typedef Arrangement< IdentifierIds
 
- Public Types inherited from bio::physical::Observer< PERSPECTIVE >
typedef PERSPECTIVE Perspective
 
- Public Types inherited from bio::chemical::Atom
typedef BondCloneAction(* BondClonePolicy) (const Bond &bond)
 
typedef void(* BondVisitor) (const Bond &bond, void *context)
 
typedef BondCloneAction(* BondMutator) (Bond &bond, void *context)
 
- Static Public Member Functions inherited from bio::physical::Class< T >
static Pointer< TConvert (Pointer< Wave > wave)
 
- Static Public Member Functions inherited from bio::physical::Wave
static Properties GetResonanceBetween (ConstWaves waves)
 
static Properties GetResonanceBetween (Pointer< const Wave > wave1, Pointer< const Wave > wave2)
 
static Properties GetResonanceBetween (Pointer< const Wave > wave, const Properties &properties)
 
- Static Public Member Functions inherited from bio::log::Writer
static void Log (Pointer< const Writer > writer, LogLevel level, const char *format,...)
 
static bool ShouldLog (Pointer< const Writer > writer, LogLevel level)
 
- Static Public Member Functions inherited from bio::physical::Class< Writer >
static Pointer< Writer > Convert (Pointer< Wave > wave)
 
- Static Public Member Functions inherited from bio::physical::Class< Filterable >
static Pointer< FilterableConvert (Pointer< Wave > wave)
 
- Static Public Member Functions inherited from bio::chemical::Atom
static BondCloneAction DefaultBondClonePolicy (const Bond &bond)
 
template<typename T >
static AtomicNumber GetBondId ()
 
- Static Public Member Functions inherited from bio::physical::Class< Atom >
static Pointer< Atom > Convert (Pointer< Wave > wave)
 
- Protected Types inherited from bio::physical::Identifiable< Id >
typedef Id Identifier
 
typedef Arrangement< IdentifierIds
 
- Protected Types inherited from bio::physical::Observer< PERSPECTIVE >
typedef PERSPECTIVE Perspective
 
- Protected Types inherited from bio::chemical::Atom
typedef BondCloneAction(* BondClonePolicy) (const Bond &bond)
 
typedef void(* BondVisitor) (const Bond &bond, void *context)
 
typedef BondCloneAction(* BondMutator) (Bond &bond, void *context)
 
- Protected Member Functions inherited from bio::chemical::Elementary< T >
void RegisterType ()
 
 Elementary (const Properties properties)
 
 Elementary ()
 
virtual ~Elementary ()
 
- Protected Member Functions inherited from bio::physical::Identifiable< Id >
virtual void InitializeImplementation (ByteStreams &args)
 
friend::std::ostream & operator<< (std::ostream &out, const Identifiable< Id > &t)
 
 Identifiable (Pointer< Perspective< Id > > perspective=NULL)
 
 Identifiable (const Name &name, Pointer< Perspective< Id > > perspective=NULL)
 
 Identifiable (Identifier id, Pointer< Perspective< Id > > perspective=NULL)
 
 Identifiable (const Identifiable &other)
 
virtual ~Identifiable ()
 
virtual operator Id () const
 
virtual bool operator== (const Identifier id) const
 
virtual bool operator== (const Name &name) const
 
virtual bool operator== (const Identifiable< Id > &other) const
 
virtual Name GetName () const
 
virtual Identifier GetId () const
 
virtual bool SetName (const Name &name)
 
virtual bool SetId (Identifier id)
 
virtual bool IsName (const Name &name) const
 
virtual bool IsNameInsensitive (const Name &name) const
 
virtual bool IsId (Identifier id) const
 
virtual void SetPerspective (Pointer< Perspective< Id > > perspective)
 
- Protected Member Functions inherited from bio::physical::Observer< PERSPECTIVE >
 Observer (Pointer< Perspective > perspective=NULL)
 
 Observer (const Observer &other)
 
virtual ~Observer ()
 
virtual void SetPerspective (Pointer< Perspective > perspective)
 
virtual Pointer< PerspectiveGetPerspective () const
 
- Protected Member Functions inherited from bio::VirtualBase
 VirtualBase ()
 
virtual ~VirtualBase ()
 
void Initialize (ByteStreams &args)
 
void Initialize (ByteStream arg1)
 
void Initialize (ByteStream arg1, ByteStream arg2)
 
void Initialize (ByteStream arg1, ByteStream arg2, ByteStream arg3)
 
- Protected Member Functions inherited from bio::log::Writer
 Writer ()
 
 Writer (Filter logFilter)
 
virtual ~Writer ()
 
virtual Pointer< const WriterAsLogWriter () const
 
bool IsEnabled (LogLevel level) const
 
virtual void Log (LogLevel level, const char *format, va_list args) const
 
- Protected Member Functions inherited from bio::physical::Class< Writer >
 Class (Pointer< Writer > object, Pointer< Symmetry > symmetry=NULL)
 
 Class (Pointer< Writer > object, SymmetryFactory symmetryFactory)
 
 Class (const Class &other)
 
virtual Pointer< Writer > GetWaveObject ()
 
virtual Pointer< const Writer > GetWaveObject () const
 
virtual operator Writer & ()
 
virtual operator const Writer & () const
 
Pointer< WaveAsWave ()
 
Pointer< const WaveAsWave () const
 
virtual operator Pointer< Wave > ()
 
- Protected Member Functions inherited from bio::physical::Filterable
 Filterable ()
 
 Filterable (Filter filter)
 
virtual ~Filterable ()
 
virtual void InitializeImplementation (ByteStreams &args)
 
virtual void SetFilter (Filter filter)
 
Filter GetFilter () const
 
virtual Pointer< const SymmetrySpin () const
 
virtual Code Reify (Pointer< const Symmetry > symmetry)
 
- Protected Member Functions inherited from bio::physical::Class< Filterable >
 Class (Pointer< Filterable > object, Pointer< Symmetry > symmetry=NULL)
 
 Class (Pointer< Filterable > object, SymmetryFactory symmetryFactory)
 
 Class (const Class &other)
 
virtual Pointer< FilterableGetWaveObject ()
 
virtual Pointer< const FilterableGetWaveObject () const
 
virtual operator Filterable & ()
 
virtual operator const Filterable & () const
 
Pointer< WaveAsWave ()
 
Pointer< const WaveAsWave () const
 
virtual operator Pointer< Wave > ()
 
- Protected Member Functions inherited from bio::chemical::Atom
void IndexBond (AtomicNumber bondedId, Valence position)
 
void UnindexBond (AtomicNumber bondedId)
 
 Atom ()
 
 Atom (const Atom &other)
 
virtual ~Atom ()
 
void CloneBondsFrom (const Atom &other, BondClonePolicy policy=&Atom::DefaultBondClonePolicy)
 
virtual Pointer< const physical::SymmetrySpin () const
 
virtual Code Reify (Pointer< const physical::Symmetry > symmetry)
 
Pointer< physical::WaveGetBonded (Valence position)
 
Pointer< const physical::WaveGetBonded (Valence position) const
 
Pointer< const physical::WaveResolveBondedForReadById (AtomicNumber bondId) const
 
Pointer< physical::WaveResolveBondedForWriteById (AtomicNumber bondId)
 
template<typename T >
Cow< TAsBonded () const
 
template<typename T >
Pointer< TAsBondedQuantum () const
 
template<typename T >
atom_detail::AsResultType< T, type::IsWaveImplementation< typenametype::RemovePointer< T >::Type >::sValue >::Type As () const
 
template<typename T >
 operator T () const
 
template<typename T >
Valence FormBond (T toBond, BondType type=bond_type::Unknown())
 
template<typename T >
bool BreakBond (T toDisassociate, BondType type=bond_type::Unknown())
 
Valence GetBondPosition (AtomicNumber bondedId) const
 
Valence GetBondPosition (const Name &typeName) const
 
Valence GetBondPositionLocked (AtomicNumber bondedId) const
 
template<typename T >
Valence GetBondPosition () const
 
BondType GetBondType (Valence position) const
 
template<typename T >
BondType GetBondType () const
 
Pointer< BondsGetAllBonds ()
 
Pointer< const BondsGetAllBonds () const
 
void ForEachBond (BondVisitor visitor, void *context=NULL) const
 
void ForEachBondMutable (BondMutator mutator, void *context=NULL)
 
virtual Valence FormBondImplementation (Pointer< physical::Wave > toBond, AtomicNumber id, BondType type)
 
Valence FormBondImplementation (Pointer< physical::Wave > toBond, AtomicNumber id, BondType type, bool ownsBonded)
 
Valence FormBondImplementationLocked (Pointer< physical::Wave > toBond, AtomicNumber id, BondType type, bool ownsBonded)
 
virtual bool BreakBondImplementation (AtomicNumber id, BondType type)
 
bool BreakBondImplementationLocked (AtomicNumber id, BondType type)
 
- Protected Member Functions inherited from bio::physical::Class< Atom >
 Class (Pointer< Atom > object, Pointer< Symmetry > symmetry=NULL)
 
 Class (Pointer< Atom > object, SymmetryFactory symmetryFactory)
 
 Class (const Class &other)
 
virtual Pointer< Atom > GetWaveObject ()
 
virtual Pointer< const Atom > GetWaveObject () const
 
virtual operator Atom & ()
 
virtual operator const Atom & () const
 
Pointer< WaveAsWave ()
 
Pointer< const WaveAsWave () const
 
virtual operator Pointer< Wave > ()
 
- Protected Member Functions inherited from bio::ThreadSafe
 ThreadSafe ()
 
 ThreadSafe (const ThreadSafe &toCopy)
 
ThreadSafeoperator= (const ThreadSafe &toCopy)
 
 ~ThreadSafe ()
 
void LockThread () const
 
void UnlockThread () const
 
void LockMutexShared () const
 
void UnlockMutexShared () const
 
- Static Protected Member Functions inherited from bio::log::Writer
static void Log (Pointer< const Writer > writer, LogLevel level, const char *format,...)
 
static bool ShouldLog (Pointer< const Writer > writer, LogLevel level)
 
- Static Protected Member Functions inherited from bio::physical::Class< Writer >
static Pointer< Writer > Convert (Pointer< Wave > wave)
 
- Static Protected Member Functions inherited from bio::physical::Class< Filterable >
static Pointer< FilterableConvert (Pointer< Wave > wave)
 
- Static Protected Member Functions inherited from bio::chemical::Atom
static BondCloneAction DefaultBondClonePolicy (const Bond &bond)
 
template<typename T >
static AtomicNumber GetBondId ()
 
- Static Protected Member Functions inherited from bio::physical::Class< Atom >
static Pointer< Atom > Convert (Pointer< Wave > wave)
 

Detailed Description

Firing Condition Impulses are simple function pointer wrappers that allow different functions to be called upon different triggers.
firing_condition::Impulses can be enabled/disabled for ease of use.
firing_condition::Impulses should specify the RETURN value for their caller, DetermineAndCallImpulseTriggers(), via the bool shouldBeActive.
Impulses use Name instead of Id as they need to be created before Proteins can be added to them.

Constructor & Destructor Documentation

◆ Impulse()

bio::neural::Impulse::Impulse ( FiringCondition  trigger = firing_condition::None(),
Name  impulseName = "",
Pointer< Neuron caller = NULL,
bool  shouldBeActive = true 
)

Disambiguate all class methods.

Parameters
trigger
impulseName
caller
shouldBeActive

◆ ~Impulse()

bio::neural::Impulse::~Impulse ( )
virtual

Member Function Documentation

◆ GetImpulseProtein()

Pointer< molecular::Protein > bio::neural::Impulse::GetImpulseProtein ( )
Returns
the Protein that implements *this Impulse

◆ GetTrigger()

FiringCondition bio::neural::Impulse::GetTrigger ( ) const
Returns
the FiringCondition that triggers *this Impulse

◆ Send()

bool bio::neural::Impulse::Send ( )
Returns
whether or not the caller should be active.

◆ SetCaller()

void bio::neural::Impulse::SetCaller ( Pointer< Neuron caller)
Parameters
callerthe Neuron that triggered *this Impulse.

Member Data Documentation

◆ mCaller

Pointer< Neuron > bio::neural::Impulse::mCaller
protected

◆ mImpulse

Pointer< molecular::Protein > bio::neural::Impulse::mImpulse
protected

◆ mShouldBeActive

bool bio::neural::Impulse::mShouldBeActive
protected

◆ mTrigger

FiringCondition bio::neural::Impulse::mTrigger
protected

The documentation for this class was generated from the following files: